RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 LRRC8CQ8TDW0 803 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 SPOCK2Q92563 424 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 CAPNS2Q96L46 248 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 EPAS1Q99814 870 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 ACTR5Q9H9F9 607 aaPredicted RBP14.46□□□□□ -0.09
VPS33B-208ENST00000574755 PATJQ8NI35 1801 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 CXorf49A8MYA2 514 aaPredicted RBP14.46□□□□□ -0.1
VPS33B-208ENST00000574755 TM9SF1O15321 606 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 INPPL1O15357 1258 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 B4GALT3O60512 393 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 DDHD2O94830 711 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 GRIK1P39086 918 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 ACTN3Q08043 901 aaPredicted RBP14.46□□□□□ -0.1
VPS33B-208ENST00000574755 TTC39BQ5VTQ0 682 aaPredicted RBP14.46□□□□□ -0.1
VPS33B-208ENST00000574755 C4orf50Q6ZRC1 276 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 PID1Q7Z2X4 250 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 TRIM62Q9BVG3 475 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 SNX10Q9Y5X0 201 aa14.46□□□□□ -0.1
VPS33B-208ENST00000574755 DNM1LO00429 736 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 NCAM2O15394 837 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 LPXNO60711 386 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 MLNP12872 115 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 ADRA1DP25100 572 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 EPHB2P29323 1055 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 SLC5A3P53794 718 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 PARP6Q2NL67 630 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 CLLU1OSQ5K130 101 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 CGB2Q6NT52 195 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 SCML4Q8N228 414 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 NPWQ8N729 165 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 URGCPQ8TCY9 931 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 DQX1Q8TE96 717 aaKnown RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 GRAMD1AQ96CP6 724 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 SERAC1Q96JX3 654 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 STARD7Q9NQZ5 370 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 EIF2B3Q9NR50 452 aaKnown RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 PIH1D1Q9NWS0 290 aaKnown RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 KLHL8Q9P2G9 620 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 PCDHB8Q9UN66 801 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 RAD54BQ9Y620 910 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 A0A1W2PQ45 241 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 A0A1W2PQY0 241 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 KIF3CO14782 793 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 KRT37O76014 449 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 LRIG2O94898 1065 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 OR4Q2P0C623 313 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 OR1G1P47890 313 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 LACTB2Q53H82 288 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 NOMO2Q5JPE7 1267 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 LRRC8BQ6P9F7 803 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 TRMT10BQ6PF06 316 aaKnown RBP14.45□□□□□ -0.1
VPS33B-208ENST00000574755 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 RGS9BPQ6ZS82 235 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 LINC01599Q8WXQ3 324 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 STAMBPL1Q96FJ0 436 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 SMYD2Q9NRG4 433 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 ZNF180Q9UJW8 692 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 PHTF1Q9UMS5 762 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 ARL2BPQ9Y2Y0 163 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 PCDHA11Q9Y5I1 949 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 SHROOM3Q8TF72 1996 aa14.45□□□□□ -0.1
VPS33B-208ENST00000574755 COL4A4P53420 1690 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 PYGBP11216 843 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SERPINB6P35237 376 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 ZNF135P52742 658 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SESN2P58004 480 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 CRADDP78560 199 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 DEFB115Q30KQ5 88 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SLC39A12Q504Y0 691 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 LGSNQ5TDP6 509 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 CCDC63Q8NA47 563 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 C12orf65Q9H3J6 166 aaKnown RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SLCO1B3Q9NPD5 702 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 ABCF3Q9NUQ8 709 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 GGT7Q9UJ14 662 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 NUP205Q92621 2012 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 MYO16Q9Y6X6 1858 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 WDR27A2RRH5 827 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 WDR91A4D1P6 747 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SDR42E2A6NKP2 422 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 TRIM49D1C9J1S8 452 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 ZNF189O75820 626 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SNRPAP09012 282 aaKnown RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 CSH1P0DML2 217 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 CSH2P0DML3 217 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 MX2P20592 715 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 SCTRP47872 440 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 DSC1Q08554 894 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 PPIDQ08752 370 aaKnown RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 BTBD8Q5XKL5 378 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 PXYLP1Q8TE99 480 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 APOPT1Q96IL0 206 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 FAM193BQ96PV7 902 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 TSEN34Q9BSV6 310 aaKnown RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 ABCC13Q9NSE7 274 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 ABI2Q9NYB9 513 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-208ENST00000574755 KLHL14Q9P2G3 628 aa14.44□□□□□ -0.1
VPS33B-208ENST00000574755 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms