RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
RPAIN-214ENST00000574003 POPDC2Q9HBU9 364 aa11.75□□□□□ -0.53
RPAIN-214ENST00000574003 TLR6Q9Y2C9 796 aa11.75□□□□□ -0.53
RPAIN-214ENST00000574003 NFE2L3Q9Y4A8 694 aa11.75□□□□□ -0.53
RPAIN-214ENST00000574003 PCNX2A6NKB5 2137 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 AP5Z1O43299 807 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 FOXD2O60548 495 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 ZNF217O75362 1048 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 IGLV3-25P01717 112 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 ENGP17813 658 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 TFE3P19532 575 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 TACR2P21452 398 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 IRAK1P51617 712 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 YWHAZP63104 245 aaKnown RBP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 PTK2Q05397 1052 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 KLHDC7AQ5VTJ3 777 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 PSAPL1Q6NUJ1 521 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 SLC36A4Q6YBV0 504 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 C11orf57Q6ZUT1 292 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 KIAA0907Q7Z7F0 614 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 CHSY1Q86X52 802 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 FAM114A1Q8IWE2 563 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 FAM71AQ8IYT1 594 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 WFIKKN2Q8TEU8 576 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 SIPA1Q96FS4 1042 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 GPR174Q9BXC1 333 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 VPS16Q9H269 839 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 FAM204AQ9H8W3 233 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 TMEM9BQ9NQ34 198 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 USP36Q9P275 1121 aaKnown RBP11.74□□□□□ -0.53
RPAIN-214ENST00000574003 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 SNX10Q9Y5X0 201 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 SLCO1B1Q9Y6L6 691 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 CHD8Q9HCK8 2581 aa11.74□□□□□ -0.53
RPAIN-214ENST00000574003 EPHB6O15197 1021 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 SART1O43290 800 aaKnown RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 TIMM44O43615 452 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 NDUFS2O75306 463 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 KCNK5O95279 499 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 ADRB1P08588 477 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 POLR2EP19388 210 aaKnown RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 CD6P30203 668 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 KRT9P35527 623 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 CSKP41240 450 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 TPMTP51580 245 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 ZNF445P59923 1031 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 RNASE9P60153 205 aaKnown RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 NME3Q13232 169 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 EIF4EBP2Q13542 120 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 EIF4HQ15056 248 aaKnown RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 MEA1Q16626 185 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 OTUD1Q5VV17 481 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 OLFML1Q6UWY5 402 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 RGL4Q8IZJ4 473 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 APCDD1Q8J025 514 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 AHI1Q8N157 1196 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 HJURPQ8NCD3 748 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 PRCCQ92733 491 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 AZIN2Q96A70 460 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 MYO19Q96H55 970 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 ZNF419Q96HQ0 510 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 CNTNAP3BQ96NU0 1288 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 SLC2A13Q96QE2 648 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 GTPBP2Q9BX10 602 aaKnown RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 NAA15Q9BXJ9 866 aaKnown RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 TMEM245Q9H330 911 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 PRSS16Q9NQE7 514 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 ANLNQ9NQW6 1124 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 ITM2CQ9NQX7 267 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 DDIT4Q9NX09 232 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 WSB2Q9NYS7 404 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 EVLQ9UI08 416 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-214ENST00000574003 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
RPAIN-214ENST00000574003 MAP1BP46821 2468 aaKnown RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 KCNU1A8MYU2 1149 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 NPC1O15118 1278 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 LUC7L3O95232 432 aaKnown RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 APOEP02649 317 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 DLDP09622 509 aaKnown RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 CYP11B1P15538 503 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 NOVA1P51513 510 aaKnown RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 RPS14P62263 151 aaKnown RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 CDK17Q00537 523 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 CENPCQ03188 943 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 NNTQ13423 1086 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 CAMK2GQ13555 558 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 CDH18Q13634 790 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 KRT31Q15323 416 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 DUOXA1Q1HG43 343 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 PITRM1Q5JRX3 1037 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-214ENST00000574003 SLC23A3Q6PIS1 610 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 BEND5Q7L4P6 421 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 PHLDB2Q86SQ0 1253 aa11.72□□□□□ -0.53
RPAIN-214ENST00000574003 C14orf80Q86SX3 495 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms