RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MOCS3O95396 460 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 FYNP06241 537 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SYPP08247 313 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SERPINF2P08697 491 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 PON1P27169 355 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 OXTRP30559 389 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 CD70P32970 193 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 KRT9P35527 623 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 TPMTP51580 245 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 ST8SIA6P61647 398 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 RPS24P62847 133 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 YWHAZP63104 245 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 PTK2Q05397 1052 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 ZNF252P-AS1Q0IIN9 211 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 ENPP2Q13822 863 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 RAPGEF1Q13905 1077 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 PLEKHG6Q3KR16 790 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 DCAF6Q58WW2 860 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 MPP7Q5T2T1 576 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SYPL2Q5VXT5 272 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 PEAR1Q5VY43 1037 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 RAP1GAP2Q684P5 730 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 NADSYN1Q6IA69 706 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 OR6B2Q6IFH4 312 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 IRF2BP1Q8IU81 584 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 LGI2Q8N0V4 545 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 CFAP52Q8N1V2 620 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 ATP6V0D2Q8N8Y2 350 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 C1orf131Q8NDD1 294 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 OR2T3Q8NH03 318 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 STK32AQ8WU08 396 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SHC3Q92529 594 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 RNF34Q969K3 372 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 AZIN2Q96A70 460 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 PPP1R13BQ96KQ4 1090 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 PRICKLE1Q96MT3 831 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 TUBGCP2Q9BSJ2 902 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 NUCKS1Q9H1E3 243 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 LHX5Q9H2C1 402 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 NDST4Q9H3R1 872 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC32A1Q9H598 525 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 WSB2Q9NYS7 404 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 USP36Q9P275 1121 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 SLC12A6Q9UHW9 1150 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 CYTH4Q9UIA0 394 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 DNAJC12Q9UKB3 198 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 ANGPTL2Q9UKU9 493 aa10.01□□□□□ -0.81
NPLOC4-212ENST00000573328 KCNJ18B7U540 433 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 F5H5T6 163 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 GIPC1O14908 333 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 GRAP2O75791 330 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 TRUB2O95900 331 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 DNTTP04053 509 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 DLDP09622 509 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 PNMA6AP0CW24 399 aaPredicted RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 ABCB4P21439 1286 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 TACR2P21452 398 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 MAOBP27338 520 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 CSKP41240 450 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 RPL34P49207 117 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 COPAP53621 1224 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 SNX16P57768 344 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 CDK17Q00537 523 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 KCNJ12Q14500 433 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 TTC31Q49AM3 519 aaPredicted RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 VWA3BQ502W6 1294 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 ZC3H12AQ5D1E8 599 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 MS4A13Q5J8X5 152 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 DCAF12L1Q5VU92 463 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 RNF219Q5W0B1 726 aaPredicted RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 TMEM110Q86TL2 294 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 METTL3Q86U44 580 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 ADIPOR2Q86V24 386 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 ZCCHC9Q8N567 271 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 MINDY1Q8N5J2 469 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 DEFB124Q8NES8 71 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 GANCQ8TET4 914 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 BTN2A3PQ96KV6 586 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 CPXM1Q96SM3 734 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 NUP58Q9BVL2 599 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 ITM2CQ9NQX7 267 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 DDIT4Q9NX09 232 aa10□□□□□ -0.81
NPLOC4-212ENST00000573328 AJAP1Q9UKB5 411 aaPredicted RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 TPRP12270 2363 aaKnown RBP10□□□□□ -0.81
NPLOC4-212ENST00000573328 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 FAM170AA1A519 330 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 PCNX2A6NKB5 2137 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 HSF2BPO75031 334 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 LUC7L3O95232 432 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 ASLP04424 464 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 TPM2P07951 284 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 CEACAM1P13688 526 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 ERCC5P28715 1186 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 NUMBP49757 651 aa9.99□□□□□ -0.81
NPLOC4-212ENST00000573328 PITX1P78337 314 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms