RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 RASSF4Q9H2L5 321 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CSNK1G1Q9HCP0 422 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 SPHK2Q9NRA0 654 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 DNAJC17Q9NVM6 304 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CALCOCO1Q9P1Z2 691 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 SH3BP1Q9Y3L3 701 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 FAM237AA0A1B0GTK4 181 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 A0A1W2PQF6 199 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 E2F8A0AVK6 867 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 HOXC11O43248 304 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CILPO75339 1184 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 RHOBTB3O94955 611 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 KIF20AO95235 890 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 FAM200BP0CF97 657 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 RARGP13631 454 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 ITPKAP23677 461 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 P2RY2P41231 377 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 LIMK1P53667 647 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 AMPD2Q01433 879 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 ELF2Q15723 593 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CBWD6Q4V339 395 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CBWD3Q5JTY5 395 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CBWD5Q5RIA9 395 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 SNX30Q5VWJ9 437 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 IL31Q6EBC2 164 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 BHLHA9Q7RTU4 235 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CRYBG2Q8N1P7 616 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 LOXL4Q96JB6 756 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 VPS45Q9NRW7 570 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CACNA2D2Q9NY47 1150 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 CGNQ9P2M7 1197 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 TRAF3IP3Q9Y228 551 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 ATP8B3O60423 1300 aa9.71□□□□□ -0.86
NPLOC4-210ENST00000572824 TBC1D3BA6NDS4 549 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 STC2O76061 302 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 ALBP02768 609 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 TYRP14679 529 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 PFKLP17858 780 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 GRIA2P42262 883 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 PDE6CP51160 858 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 NOVA1P51513 510 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 KIF11P52732 1056 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 FAM193AP78312 1265 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 MRPS21P82921 87 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 GAD2Q05329 585 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 ST3GAL2Q16842 350 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SGSM1Q2NKQ1 1148 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 UAP1L1Q3KQV9 507 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 C10orf120Q5SQS8 335 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SLC41A1Q8IVJ1 513 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SVOPQ8N4V2 548 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SLC4A11Q8NBS3 891 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 PDZD8Q8NEN9 1154 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 DEFB124Q8NES8 71 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 GOLGA5Q8TBA6 731 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 NUDT8Q8WV74 236 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SORCS1Q8WY21 1168 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 OVCA2Q8WZ82 227 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 TTC9Q92623 222 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 KAT5Q92993 513 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 CYFIP2Q96F07 1278 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 TNIP3Q96KP6 325 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 CEP295NLQ96MC4 621 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 HNRNPABQ99729 332 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 ZSWIM1Q9BR11 485 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 LSM14BQ9BX40 385 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 BBS2Q9BXC9 721 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 NACA2Q9H009 215 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 CFAP45Q9UL16 551 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 CYP8B1Q9UNU6 501 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SCML2Q9UQR0 700 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 PCDHGA5Q9Y5G8 931 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 SLCO1B1Q9Y6L6 691 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 PLXNA2O75051 1894 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 PKD1L2Q7Z442 2459 aa9.7□□□□□ -0.86
NPLOC4-210ENST00000572824 A0A0A0MRY4 1105 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 C1QTNF9BB2RNN3 333 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 PIK3R2O00459 728 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 SLC9A3R1O14745 358 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 CALUO43852 315 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 GADD45BO75293 160 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 RGS9O75916 674 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 ZNF202O95125 648 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 FAM163BP0C2L3 166 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 CISD3P0C7P0 127 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 C1QTNF9P0C862 333 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 HOXB2P14652 356 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 SDHBP21912 280 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 EIF2DP41214 584 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 PPP3CCP48454 512 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 TUBP50607 506 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 SGSHP51688 502 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 RAD23BP54727 409 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 KRT85P78386 507 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 ZNF252P-AS1Q0IIN9 211 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 EFEMP1Q12805 493 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 LRMPQ12912 555 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 GEN1Q17RS7 908 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms