RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 COL9A2Q14055 689 aaPredicted RBP16.38■□□□□ 0.21
CHD3-215ENST00000572750 PPP2R5DQ14738 602 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 CCDC14Q49A88 953 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 MPPE1Q53F39 396 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 PPP1R15BQ5SWA1 713 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 SH3PXD2AQ5TCZ1 1133 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 PIK3R6Q5UE93 754 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 CNGA4Q8IV77 575 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 ATP6V0D2Q8N8Y2 350 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 TERB1Q8NA31 727 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 AZIN2Q96A70 460 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 PGAP3Q96FM1 320 aaPredicted RBP16.38■□□□□ 0.21
CHD3-215ENST00000572750 ANLNQ9NQW6 1124 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 TMPRSS4Q9NRS4 437 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 CLEC4EQ9ULY5 219 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 SIGLEC16A6NMB1 481 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 I6L893 689 aaPredicted RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 K7EQS6 105 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 PAGE1O75459 146 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 ADCY5O95622 1261 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 GPD1P21695 349 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 GRIA2P42262 883 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 DGKGP49619 791 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 CXCR3P49682 368 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 RPS24P62847 133 aaKnown RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 GFPT1Q06210 699 aaPredicted RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 MAMLD1Q13495 774 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 MS4A13Q5J8X5 152 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 SND1Q7KZF4 910 aaKnown RBP eCLIP16.37■□□□□ 0.21
CHD3-215ENST00000572750 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 FAM131BQ86XD5 332 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 LGI2Q8N0V4 545 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 HJURPQ8NCD3 748 aaPredicted RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 VCPIP1Q96JH7 1222 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 TKTL2Q9H0I9 626 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 ZDHHC4Q9NPG8 344 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 ZNHIT6Q9NWK9 470 aaKnown RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 C2orf42Q9NWW7 574 aa16.37■□□□□ 0.21
CHD3-215ENST00000572750 CNOT8Q9UFF9 292 aaKnown RBP16.37■□□□□ 0.21
CHD3-215ENST00000572750 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 CCP110O43303 1012 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 TBL1XO60907 577 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 TACR2P21452 398 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 PTPN9P43378 593 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 OGDHQ02218 1023 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 BRMS1LQ5PSV4 323 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 C10orf76Q5T2E6 689 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 PLEKHA7Q6IQ23 1121 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 DCUN1D2Q6PH85 259 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 CIR1Q86X95 450 aaPredicted RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 C1orf210Q8IVY1 113 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 CFAP52Q8N1V2 620 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 SYNPOQ8N3V7 929 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 TC2NQ8N9U0 490 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 RPLP0P6Q8NHW5 317 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 WFDC5Q8TCV5 224 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 FAM172AQ8WUF8 416 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 TMA16Q96EY4 203 aaKnown RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 CHP1Q99653 195 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 PRMT1Q99873 361 aaKnown RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 DDX50Q9BQ39 737 aaKnown RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 DEF6Q9H4E7 631 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 PARVAQ9NVD7 372 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 ARHGEF38Q9NXL2 777 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 STIM2Q9P246 746 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 MYO1AQ9UBC5 1043 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 SLC12A6Q9UHW9 1150 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 HS3ST4Q9Y661 456 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 FANCMQ8IYD8 2048 aa16.36■□□□□ 0.21
CHD3-215ENST00000572750 MUC22E2RYF6 1773 aaPredicted RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 FASNP49327 2511 aaKnown RBP16.36■□□□□ 0.21
CHD3-215ENST00000572750 CACNA1IQ9P0X4 2223 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 FAM208BQ5VWN6 2430 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 TYW5A2RUC4 315 aaKnown RBP16.35■□□□□ 0.21
CHD3-215ENST00000572750 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 F5H5T6 163 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 F9P00740 461 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 CISD3P0C7P0 127 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 CHRM1P11229 460 aaPredicted RBP16.35■□□□□ 0.21
CHD3-215ENST00000572750 IRAK1P51617 712 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 HDAC4P56524 1084 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 SATB1Q01826 763 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 GEN1Q17RS7 908 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 FBXO43Q4G163 708 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 C2orf27AQ580R0 203 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 CCDC122Q5T0U0 273 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 ALKBH5Q6P6C2 394 aaKnown RBP16.35■□□□□ 0.21
CHD3-215ENST00000572750 DRC7Q8IY82 874 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 TRIM11Q96F44 468 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 IER2Q9BTL4 223 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 SIK2Q9H0K1 926 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 THAP2Q9H0W7 228 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms