RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CFAP52Q8N1V2 620 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 WFIKKN2Q8TEU8 576 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 PRCCQ92733 491 aaPredicted RBP18.81■□□□□ 0.6
CHD3-214ENST00000572579 TMEM121BQ9BXQ6 578 aaPredicted RBP18.81■□□□□ 0.6
CHD3-214ENST00000572579 SIX2Q9NPC8 291 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 ST7Q9NRC1 585 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 DNAAF2Q9NVR5 837 aaKnown RBP18.81■□□□□ 0.6
CHD3-214ENST00000572579 STIM2Q9P246 746 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 TLR6Q9Y2C9 796 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 PON1P27169 355 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 ACSL1P33121 698 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 SLC11A2P49281 568 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 UBE2HP62256 183 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 RPS14P62263 151 aaKnown RBP18.8■□□□□ 0.6
CHD3-214ENST00000572579 FOXC1Q12948 553 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 ST3GAL2Q16842 350 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 FNDC3BQ53EP0 1204 aaKnown RBP18.8■□□□□ 0.6
CHD3-214ENST00000572579 ZC3H12AQ5D1E8 599 aaKnown RBP18.8■□□□□ 0.6
CHD3-214ENST00000572579 MS4A13Q5J8X5 152 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 DCAF12L1Q5VU92 463 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 BEND5Q7L4P6 421 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 FAM124AQ86V42 546 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 RGL4Q8IZJ4 473 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 CADM4Q8NFZ8 388 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 FIBINQ8TAL6 211 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 FOXJ1Q92949 421 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 TTC17Q96AE7 1141 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 MRGPRX3Q96LB0 322 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 CAMK1GQ96NX5 476 aa18.8■□□□□ 0.6
CHD3-214ENST00000572579 IRAK2O43187 625 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 CTSOP43234 321 aaPredicted RBP18.79■□□□□ 0.6
CHD3-214ENST00000572579 NNTQ13423 1086 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 PLEKHG6Q3KR16 790 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 DCAF6Q58WW2 860 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 AHI1Q8N157 1196 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 SHC3Q92529 594 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 FAM149B1Q96BN6 582 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 CPXM1Q96SM3 734 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 NUP58Q9BVL2 599 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 C6orf106Q9H6K1 298 aaPredicted RBP18.79■□□□□ 0.6
CHD3-214ENST00000572579 IL21RQ9HBE5 538 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 PLA2G4CQ9UP65 541 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 ZZEF1O43149 2961 aa18.79■□□□□ 0.6
CHD3-214ENST00000572579 AKAP13Q12802 2813 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 C1QTNF9BB2RNN3 333 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 THAP12O43422 761 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 C1QTNF9P0C862 333 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 PNMA6AP0CW24 399 aaPredicted RBP18.78■□□□□ 0.6
CHD3-214ENST00000572579 OXTRP30559 389 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 GNA15P30679 374 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 CSKP41240 450 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 ACADSBP45954 432 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 GRIK2Q13002 908 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 PDCLQ13371 301 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 MEA1Q16626 185 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 ARHGAP44Q17R89 818 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 WDR45BQ5MNZ6 344 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 CREBRFQ8IUR6 639 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 MFN1Q8IWA4 741 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 ZCCHC9Q8N567 271 aaKnown RBP18.78■□□□□ 0.6
CHD3-214ENST00000572579 ORAI3Q9BRQ5 295 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 ADAM33Q9BZ11 813 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 IRX2Q9BZI1 471 aaPredicted RBP18.78■□□□□ 0.6
CHD3-214ENST00000572579 EIF2B4Q9UI10 523 aaKnown RBP18.78■□□□□ 0.6
CHD3-214ENST00000572579 NFE2L3Q9Y4A8 694 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 CKAP5Q14008 2032 aa18.78■□□□□ 0.6
CHD3-214ENST00000572579 NUMA1Q14980 2115 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 KNL1Q8NG31 2342 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 KCNU1A8MYU2 1149 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 SH3BP5O60239 455 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 OPHN1O60890 802 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 FGFR1OPO95684 399 aaKnown RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 TRUB2O95900 331 aaKnown RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 MOCS2O96007 188 aaPredicted RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 YWHAZP63104 245 aaKnown RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 ARID5AQ03989 594 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 SYCP2LQ5T4T6 812 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 GBP6Q6ZN66 633 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 ENOSF1Q7L5Y1 443 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 RABEPKQ7Z6M1 372 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 PASD1Q8IV76 773 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 APCDD1Q8J025 514 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 HJURPQ8NCD3 748 aaPredicted RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 GOLGA1Q92805 767 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 SERPINB11Q96P15 392 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 PRMT1Q99873 361 aaKnown RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 MIR1-1HGQ9H1L0 117 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 LHX5Q9H2C1 402 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 APEX2Q9UBZ4 518 aa18.77■□□□□ 0.6
CHD3-214ENST00000572579 MUC22E2RYF6 1773 aaPredicted RBP18.77■□□□□ 0.6
CHD3-214ENST00000572579 ADAMTS9Q9P2N4 1935 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 A0A1B0GTW7 788 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 MEI4A8MW99 385 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
CHD3-214ENST00000572579 MED7O43513 233 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 ATP5BP06576 529 aaKnown RBP18.76■□□□□ 0.59
CHD3-214ENST00000572579 ACADMP11310 421 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 CLCN1P35523 988 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 USP8P40818 1118 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 NUMBP49757 651 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms