RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 DNAJC17Q9NVM6 304 aaKnown RBP7.24□□□□□ -1.25
SMG6-209ENST00000571442 STIM2Q9P246 746 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 WDR35Q9P2L0 1181 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 MYO1AQ9UBC5 1043 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 CNOT8Q9UFF9 292 aaKnown RBP7.24□□□□□ -1.25
SMG6-209ENST00000571442 INTS6Q9UL03 887 aaKnown RBP7.24□□□□□ -1.25
SMG6-209ENST00000571442 TFR2Q9UP52 801 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 NEU3Q9UQ49 428 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 ZNF510Q9Y2H8 683 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 MRPS17Q9Y2R5 130 aaKnown RBP7.24□□□□□ -1.25
SMG6-209ENST00000571442 GVINP1Q7Z2Y8 2422 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 CFAP54Q96N23 3096 aa7.24□□□□□ -1.25
SMG6-209ENST00000571442 TMEM191CA6NGB0 347 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 WASH3PC4AMC7 463 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 AKR1B15C9JRZ8 316 aaPredicted RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 FAM72CH0Y354 149 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 H0Y858 1186 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 K7ESF4 209 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 ADAM23O75077 832 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 APOEP02649 317 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 DRD1P21728 446 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 SDC4P31431 198 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CCR1P32246 355 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 GBP1P32455 592 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CD70P32970 193 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 RDXP35241 583 aaKnown RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 TIE1P35590 1138 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CHKAP35790 457 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 EIF2DP41214 584 aaKnown RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 WASP42768 502 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 PTPN9P43378 593 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 SLC11A2P49281 568 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 DGKGP49619 791 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 ZNF143P52747 638 aaPredicted RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 GALCP54803 685 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 SNX16P57768 344 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 GRSF1Q12849 480 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMG6-209ENST00000571442 LMAN2Q12907 356 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 ANGPT1Q15389 498 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CA9Q16790 459 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 MPPE1Q53F39 396 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 ALFQ53S48 1182 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 C2orf27AQ580R0 203 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 DGKKQ5KSL6 1271 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CCDC122Q5T0U0 273 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 FAM72AQ5TYM5 149 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 GRAMD4Q6IC98 578 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 FAM72DQ6L9T8 149 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 ALKBH5Q6P6C2 394 aaKnown RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CHSY1Q86X52 802 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 FAM72BQ86X60 149 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 TMEM139Q8IV31 216 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 C1orf210Q8IVY1 113 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 DRC7Q8IY82 874 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 PYROXD2Q8N2H3 581 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 CCDC33Q8N5R6 958 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 ATP6V0D2Q8N8Y2 350 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 IL17RCQ8NAC3 791 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 MSANTD4Q8NCY6 345 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 RPLP0P6Q8NHW5 317 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 FAM172AQ8WUF8 416 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 TMA16Q96EY4 203 aaKnown RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 VCPIP1Q96JH7 1222 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 BTN2A3PQ96KV6 586 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 TRIM62Q9BVG3 475 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 SIK2Q9H0K1 926 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 NHEJ1Q9H9Q4 299 aaPredicted RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 PRMT8Q9NR22 394 aaPredicted RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 SPATA6Q9NWH7 488 aaPredicted RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMG6-209ENST00000571442 GPATCH2LQ9NWQ4 482 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 DEC1Q9P2X7 70 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 ZNF212Q9UDV6 495 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 VANGL2Q9ULK5 521 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 STAP1Q9ULZ2 295 aa7.23□□□□□ -1.25
SMG6-209ENST00000571442 BZW2Q9Y6E2 419 aaKnown RBP7.23□□□□□ -1.25
SMG6-209ENST00000571442 CHD5Q8TDI0 1954 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 CKAP5Q14008 2032 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 A0A0U1RQJ8 604 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 SSU72P8A0A1W2PR75 194 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 TBC1D3BA6NDS4 549 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 SOWAHDA6NJG2 315 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 SGK1O00141 431 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 KLF8O95600 359 aaPredicted RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 APODP05090 189 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 CYP1A2P05177 515 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 SP9P0CG40 484 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 FECHP22830 423 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 IL1R2P27930 398 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 GRIA2P42262 883 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 PXNP49023 591 aaPredicted RBP7.22□□□□□ -1.25
SMG6-209ENST00000571442 NUBP1P53384 320 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 LRRC32Q14392 662 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 SLC18A3Q16572 532 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 FUT11Q495W5 492 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 C5orf22Q49AR2 442 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 BRMS1LQ5PSV4 323 aa7.22□□□□□ -1.25
SMG6-209ENST00000571442 C10orf76Q5T2E6 689 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms