RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 BEND5Q7L4P6 421 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 RABEPKQ7Z6M1 372 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 TAC4Q86UU9 113 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 CEP76Q8TAP6 659 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 ADAM32Q8TC27 787 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 AZIN2Q96A70 460 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 FCRL2Q96LA5 508 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 NOX5Q96PH1 765 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 LSM14BQ9BX40 385 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 MKRN2Q9H000 416 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 TMEM74BQ9NUR3 256 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PILRBQ9UKJ0 227 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PLA2G4CQ9UP65 541 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 NAALADL1Q9UQQ1 740 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 CNOT1A5YKK6 2376 aaKnown RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 MOCS2O96007 188 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 APOEP02649 317 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 ATP5BP06576 529 aaKnown RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 ACADMP11310 421 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 CD6P30203 668 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC6A4P31645 630 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 MAPK8P45983 427 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 ATXN3P54252 364 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 PTK2Q05397 1052 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 DUOXA1Q1HG43 343 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 TMEM110Q86TL2 294 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 METTL3Q86U44 580 aaKnown RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 CACUL1Q86Y37 369 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 TMPRSS6Q8IU80 811 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 CYB5D2Q8WUJ1 264 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 PRCCQ92733 491 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 FOXJ1Q92949 421 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 SIPA1Q96FS4 1042 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 PRICKLE1Q96MT3 831 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 CD93Q9NPY3 652 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 STIM2Q9P246 746 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 USP36Q9P275 1121 aaKnown RBP12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 CYTH4Q9UIA0 394 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 CEP83Q9Y592 693 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 ABCA7Q8IZY2 2146 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 RALGAPA1Q6GYQ0 2036 aa12.83□□□□□ -0.36
CTDNEP1-205ENST00000570828 MEI4A8MW99 385 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 KCNK5O95279 499 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 HLA-EP13747 358 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 ENGP17813 658 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 POLR2EP19388 210 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 NOVA1P51513 510 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 GFPT1Q06210 699 aaPredicted RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 CDH18Q13634 790 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 UAP1L1Q3KQV9 507 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 VWA3BQ502W6 1294 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 HSP90AA4PQ58FG1 418 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SYPL2Q5VXT5 272 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 MBLAC2Q68D91 279 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 NADSYN1Q6IA69 706 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 PSAPL1Q6NUJ1 521 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC23A3Q6PIS1 610 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 ADIPOR2Q86V24 386 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC41A1Q8IVJ1 513 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 RGL4Q8IZJ4 473 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 WFDC5Q8TCV5 224 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 TOE1Q96GM8 510 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC39A13Q96H72 371 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 PPP1R13BQ96KQ4 1090 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 TUBGCP2Q9BSJ2 902 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 NUCKS1Q9H1E3 243 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 NDST4Q9H3R1 872 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SYNCQ9H7C4 482 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 FAM204AQ9H8W3 233 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 TJP2Q9UDY2 1190 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SUSD2Q9UGT4 822 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 DNAJC12Q9UKB3 198 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC6A14Q9UN76 642 aa12.82□□□□□ -0.36
CTDNEP1-205ENST00000570828 ACACBO00763 2458 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CDX4O14627 284 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 HSF2BPO75031 334 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 GLI1P08151 1106 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 SERPINF2P08697 491 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 GNSP15586 552 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 OXTRP30559 389 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 CD70P32970 193 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 KRT9P35527 623 aa12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 MLLT3P42568 568 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-205ENST00000570828 TPMTP51580 245 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms