RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CEP104O60308 925 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 STC2O76061 302 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 URI1O94763 535 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 ENDOD1O94919 500 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZRANB2O95218 330 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 PAPLNO95428 1278 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 LATS1O95835 1130 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CYBBP04839 570 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 RARAP10276 462 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 TCF4P15884 667 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 HTR7P34969 479 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 IFNAR2P48551 515 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 MARCKSL1P49006 195 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CKAP4Q07065 602 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 USP4Q13107 963 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CBX2Q14781 532 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 PDK2Q15119 407 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 DPYSL2Q16555 572 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 RWDD4Q6NW29 188 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 MTSS1LQ765P7 747 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 OTOP3Q7RTS5 596 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 RFX6Q8HWS3 928 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 DENND1CQ8IV53 801 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 YAF2Q8IY57 180 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CELF5Q8N6W0 485 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 TDRD5Q8NAT2 981 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 EXD1Q8NHP7 514 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 MAFAQ8NHW3 353 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 SH3RF2Q8TEC5 729 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 KRT35Q92764 455 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 FGF13Q92913 245 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 SMARCD2Q92925 531 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CD101Q93033 1021 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 E2F7Q96AV8 911 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 TBC1D31Q96DN5 1066 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 PBKQ96KB5 322 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 MSLNLQ96KJ4 702 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 FCRL2Q96LA5 508 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 GUCD1Q96NT3 240 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 RPRD1AQ96P16 312 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 HAPLN3Q96S86 360 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 PEBP4Q96S96 227 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF670Q9BS34 389 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 MAK16Q9BXY0 300 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 SIK2Q9H0K1 926 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 SMG9Q9H0W8 520 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 TDP1Q9NUW8 608 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 THG1LQ9NWX6 298 aaKnown RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 ARHGEF38Q9NXL2 777 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 STIM2Q9P246 746 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 CDH7Q9ULB5 785 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 FZD10Q9ULW2 581 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 PCDHA3Q9Y5H8 950 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 SAR1BQ9Y6B6 198 aa6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZFP37Q9Y6Q3 630 aaPredicted RBP6.81□□□□□ -1.32
CTDNEP1-204ENST00000570484 PTPRDP23468 1912 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 E2F8A0AVK6 867 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 E9PAM4 449 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PI4K2BG5E9Z4 385 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SLC9A3R1O14745 358 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CEP290O15078 2479 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 FGF10O15520 208 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 GDF9O60383 454 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ACSL4O60488 711 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SRGAP2O75044 1071 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PAGE1O75459 146 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRAMEF12O95522 483 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 IGLV3-27P01718 113 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZFXP17010 805 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SP100P23497 879 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 IL1R2P27930 398 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 EPHB2P29323 1055 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 CXCR5P32302 372 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SERPINB6P35237 376 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ADRA1BP35368 520 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PAFAH1B1P43034 410 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 KCNQ1P51787 676 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 DYNLT1P63172 113 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 DLX2Q07687 328 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZNF211Q13398 564 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 TFDP2Q14188 446 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 COL19A1Q14993 1142 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PPP2R5EQ16537 467 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RAB6CQ53S08 254 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 TFDP3Q5H9I0 405 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 KAZNQ674X7 775 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RAP1GAP2Q684P5 730 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 SPOCD1Q6ZMY3 1216 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 BNIPLQ7Z465 357 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 VSIG1Q86XK7 387 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ARID3BQ8IVW6 561 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 RCOR2Q8IZ40 523 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 LGI2Q8N0V4 545 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 PHTF2Q8N3S3 785 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 ARFGAP1Q8N6T3 406 aa6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 HJURPQ8NCD3 748 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-204ENST00000570484 MAIP1Q8WWC4 291 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms