RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	LMNA	P02545	664 aa	Known RBP	18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	TIE1	P35590	1138 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	SULT2A1	Q06520	285 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	SARM1	Q6SZW1	724 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	MCOLN2	Q8IZK6	566 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	IL17RC	Q8NAC3	791 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	KDM1B	Q8NB78	822 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	METTL5	Q9NRN9	209 aa	Known RBP	18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	ELOVL2	Q9NXB9	296 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	ARHGEF38	Q9NXL2	777 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150		H0Y626	953 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150		K7ESF4	209 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	TSPAN3	O60637	253 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	CLDN11	O75508	207 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	LUC7L3	O95232	432 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	PABPC1	P11940	636 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	TDGF1	P13385	188 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	POLR2E	P19388	210 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	HNRNPH3	P31942	346 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	USP39	Q53GS9	565 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	CHST9	Q7L1S5	443 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	CNGA4	Q8IV77	575 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	LGI2	Q8N0V4	545 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	ALLC	Q8N6M5	410 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	GPR161	Q8N6U8	529 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	TXNDC5	Q8NBS9	432 aa	Known RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	OR8K1	Q8NGG5	319 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	RPRD1A	Q96P16	312 aa	Predicted RBP	18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	PCDHB18P	Q96TA0	734 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	SYT11	Q9BT88	431 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	TKTL2	Q9H0I9	626 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	EPC1	Q9H2F5	836 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	COX16	Q9P0S2	106 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	GGA2	Q9UJY4	613 aa		18.6	■□□□□ 0.57
PKD1-238	ENST00000570150	C2CD4B	A6NLJ0	364 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	EIF3CL	B5ME19	914 aa	Known RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	AXIN1	O15169	862 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	SYNCRIP	O60506	623 aa	Known RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	FOXD2	O60548	495 aa	Predicted RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	GPD1	P21695	349 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	FLT3	P36888	993 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	NNMT	P40261	264 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	ZNF143	P52747	638 aa	Predicted RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	ST8SIA6	P61647	398 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	SFSWAP	Q12872	951 aa	Known RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	RNF214	Q8ND24	703 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	EZH1	Q92800	747 aa	Predicted RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	SPACA7	Q96KW9	195 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	EIF3C	Q99613	913 aa	Known RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	GABRG3	Q99928	467 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	CIPC	Q9C0C6	399 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	PIGV	Q9NUD9	493 aa		18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	THAP10	Q9P2Z0	257 aa	Predicted RBP	18.59	■□□□□ 0.57
PKD1-238	ENST00000570150	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	ZNF217	O75362	1048 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	PAGE1	O75459	146 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	DLD	P09622	509 aa	Known RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	HOXB2	P14652	356 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	SLC6A4	P31645	630 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	HTR7	P34969	479 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	ETFB	P38117	255 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	CDH4	P55283	916 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	PTP4A2	Q12974	167 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	ZNF177	Q13360	481 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	AUH	Q13825	339 aa	Known RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	ACAP1	Q15027	740 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	C5orf22	Q49AR2	442 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	RNF219	Q5W0B1	726 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	RAP1GAP2	Q684P5	730 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	NAIF1	Q69YI7	327 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	NADSYN1	Q6IA69	706 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	RFWD3	Q6PCD5	774 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	BNIPL	Q7Z465	357 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	VSTM4	Q8IW00	320 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	FNIP1	Q8TF40	1166 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	RXFP2	Q8WXD0	754 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	CENPI	Q92674	756 aa	Predicted RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	CFAP57	Q96MR6	1250 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	TBCB	Q99426	244 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	PRMT1	Q99873	361 aa	Known RBP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	CNPY3	Q9BT09	278 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	TRIM5	Q9C035	493 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	ABCB8	Q9NUT2	735 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	SUN2	Q9UH99	717 aa		18.58	■□□□□ 0.56
PKD1-238	ENST00000570150	FTL	P02792	175 aa	Predicted RBP	18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	GYPC	P04921	128 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	CASP14	P31944	242 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	DPP6	P42658	865 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	ZNF135	P52742	658 aa	Predicted RBP	18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	NRG1	Q02297	640 aa	Predicted RBP	18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	SERPINA13P	Q6UXR4	307 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	ZNF783	Q6ZMS7	281 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	CEP68	Q76N32	757 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	ASCL5	Q7RTU5	278 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	SETD3	Q86TU7	594 aa	Predicted RBP	18.57	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms