RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PIM1P11309 404 aaPredicted RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ACADMP11310 421 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CYP2C9P11712 490 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 PORP16435 677 aaPredicted RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 PFKLP17858 780 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 FSTP19883 344 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MST1P26927 711 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 GDNFP39905 211 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CDK7P50613 346 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 PSMC1P62191 440 aaKnown RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 TMEM62Q0P6H9 643 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ATP1A4Q13733 1029 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 GRB14Q14449 540 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 BECN1Q14457 450 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 RAB3GAP1Q15042 981 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CCL14Q16627 93 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SHROOM1Q2M3G4 852 aaPredicted RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CTXN3Q4LDR2 81 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 FAM47AQ5JRC9 791 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CCDC158Q5M9N0 1113 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 TTC39AQ5SRH9 613 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 HECTD3Q5T447 861 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 OLFML2BQ68BL8 750 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MFSD5Q6N075 450 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 RINT1Q6NUQ1 792 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SLC30A6Q6NXT4 461 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ZC3H14Q6PJT7 736 aaKnown RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ZNF365Q70YC5 407 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 FRMD5Q7Z6J6 570 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ADGRA1Q86SQ6 560 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 GAS2L3Q86XJ1 694 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ZDHHC13Q8IUH4 622 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 PLA2G15Q8NCC3 412 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SHCBP1Q8NEM2 672 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MDM1Q8TC05 714 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SSH3Q8TE77 659 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 WDR60Q8WVS4 1066 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CPT1BQ92523 772 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SCAMP4Q969E2 229 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 C3orf49Q96BT1 292 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 GUCD1Q96NT3 240 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MYOCQ99972 504 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 LBHD1Q9BQE6 289 aaPredicted RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 NDC1Q9BTX1 674 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SPATA5L1Q9BVQ7 753 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 TXLNGYQ9BZA5 131 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 KATNBL1Q9H079 304 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 KIAA1683Q9H0B3 1180 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 BRD8Q9H0E9 1235 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SIK2Q9H0K1 926 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 PIH1D3Q9NQM4 214 aaKnown RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MRGBPQ9NV56 204 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ZSCAN32Q9NX65 697 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 FLRT1Q9NZU1 646 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 NDUFAF4Q9P032 175 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SLC23A1Q9UHI7 598 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 CDC42EP3Q9UKI2 254 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 DNAJC16Q9Y2G8 782 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 TBC1D30Q9Y2I9 924 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 FPGT-TNNI3KV9GXZ4 949 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 LTBP2Q14767 1821 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 ZNF236Q9UL36 1845 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MYH1P12882 1939 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 RLFQ13129 1914 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 SPTBN5Q9NRC6 3674 aaKnown RBP3.48□□□□□ -1.85
CNOT1-221ENST00000569924 NCOR1O75376 2440 aa3.48□□□□□ -1.85
CNOT1-221ENST00000569924 MYO5AQ9Y4I1 1855 aaKnown RBP3.47□□□□□ -1.85
CNOT1-221ENST00000569924 UNC80Q8N2C7 3258 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 hCG_1807616A0A1W2PRN6 198 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 CCDC78A2IDD5 438 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 VWA3AA6NCI4 1184 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 C2orf78A6NCI8 922 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 FAM90A18PA6NE21 464 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 FAM90A16PA6NEW6 464 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 TSPY2A6NKD2 308 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 FAM90A9PA6NNJ1 464 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 ZNF785A8K8V0 405 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 FAM90A5PA8MXJ8 464 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.47□□□□□ -1.85
CNOT1-221ENST00000569924 H3BNC9 293 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 M0QYG6 137 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 GTPBP1O00178 669 aaKnown RBP3.47□□□□□ -1.85
CNOT1-221ENST00000569924 KIAA0391O15091 583 aaKnown RBP3.47□□□□□ -1.85
CNOT1-221ENST00000569924 SEPT4O43236 478 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 CCNT2O60583 730 aaKnown RBP3.47□□□□□ -1.85
CNOT1-221ENST00000569924 MLYCDO95822 493 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 CHEK2O96017 543 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 KNG1P01042 644 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 VIPP01282 170 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 PROCP04070 461 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 APOA4P06727 396 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 C8BP07358 591 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 ADRB2P07550 413 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 FAM90A15PP0C7V4 464 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 FAM90A14PP0C7W9 464 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 TSPY3P0CV98 308 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 TSPY8P0CW00 308 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 RAP2AP10114 183 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 TGFB3P10600 412 aa3.47□□□□□ -1.85
CNOT1-221ENST00000569924 CYBAP13498 195 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms