RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 RHBDF2Q6PJF5 856 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 CPLX4Q7Z7G2 160 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 HERC6Q8IVU3 1022 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 PRCCQ92733 491 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 GRAMD1AQ96CP6 724 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 YME1L1Q96TA2 773 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 HINFPQ9BQA5 517 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 C11orf84Q9BUA3 381 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 PPP1R12CQ9BZL4 782 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 ETNK2Q9NVF9 386 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 SEPT10Q9P0V9 454 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 RSPH14Q9UHP6 348 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 ZNF510Q9Y2H8 683 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 SDR42E2A6NKP2 422 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 NDUFAB1O14561 156 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 PECAM1P16284 738 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 CES1P23141 567 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 HADHAP40939 763 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 YBEYP58557 167 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 MAGOHP61326 146 aaKnown RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 C10orf120Q5SQS8 335 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 CASC4Q6P4E1 433 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 PCDH19Q8TAB3 1148 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 ARHGEF2Q92974 986 aaKnown RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 ACSF2Q96CM8 615 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 HDAC11Q96DB2 347 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 HERC2P3Q9BVR0 1158 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 EMILIN2Q9BXX0 1053 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 CRISPLD2Q9H0B8 497 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 ARHGEF4Q9NR80 690 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 MRPL17Q9NRX2 175 aaKnown RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 GPATCH2LQ9NWQ4 482 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 NINJ2Q9NZG7 142 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 IGSF9Q9P2J2 1179 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 LGALS13Q9UHV8 139 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 DNMT3LQ9UJW3 386 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 SMIM23A6NLE4 172 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 F5H5T6 163 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 APRTP07741 180 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 GALTP07902 379 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 HAPLN1P10915 354 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 CCNCP24863 283 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ATP5C1P36542 298 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 MMP13P45452 471 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 RENBPP51606 427 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 KPNA2P52292 529 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 NDST2P52849 883 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 UGP2Q16851 508 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ZC3H12AQ5D1E8 599 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 HHATQ5VTY9 493 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SCARA3Q6AZY7 606 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PSRC1Q6PGN9 363 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 METTL3Q86U44 580 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 RIN2Q8WYP3 895 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 USP13Q92995 863 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 PLD4Q96BZ4 506 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ZNF512Q96ME7 567 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 CASD1Q96PB1 797 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 TXLNGYQ9BZA5 131 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SEMA4AQ9H3S1 761 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ZC3H7BQ9UGR2 993 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 NAALADL1Q9UQQ1 740 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 MAD1L1Q9Y6D9 718 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 YJEFN3A6XGL0 299 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 E7ENQ6 273 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 H3BQF6 201 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PRRG1O14668 218 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 MT-ND3P03897 115 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SOD2P04179 222 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 POLBP06746 335 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 RHOQP17081 205 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 AMPD1P23109 780 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 MAGEA6P43360 314 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 KYNUQ16719 465 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 DEFB128Q7Z7B8 93 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 DNAAF3Q8N9W5 541 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ARMC5Q96C12 935 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 CABS1Q96KC9 395 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SP110Q9HB58 689 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SSU72Q9NP77 194 aaKnown RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 PRDM5Q9NQX1 630 aaPredicted RBP6.2□□□□□ -1.42
CYLD-216ENST00000569891 MARCH2Q9P0N8 246 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 MTRRQ9UBK8 725 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 LTBP2Q14767 1821 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 I3L4J1 428 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 TULP2O00295 520 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 LATS1O95835 1130 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 GOT1P17174 413 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ERCC2P18074 760 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 NFKBIAP25963 317 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 RBL1P28749 1068 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 ECHS1P30084 290 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SLC11A1P49279 550 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SEMA5AQ13591 1074 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 SPARCL1Q14515 664 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 HECTD3Q5T447 861 aa6.2□□□□□ -1.42
CYLD-216ENST00000569891 PTCD2Q8WV60 388 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms