RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ALADP13716 330 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PTPN1P18031 435 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PTPN9P43378 593 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 ALDH18A1P54886 795 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 RPL10AP62906 217 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PPM1JQ5JR12 505 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 EFHC1Q5JVL4 640 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 ARHGAP17Q68EM7 881 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 TRIM68Q6AZZ1 485 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 RFWD3Q6PCD5 774 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 RGS9BPQ6ZS82 235 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 DNAAF3Q8N9W5 541 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 RNF34Q969K3 372 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 E2F7Q96AV8 911 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PAAF1Q9BRP4 392 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 ACSS2Q9NR19 701 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 ETAA1Q9NY74 926 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 BLOC1S6Q9UL45 172 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PSAT1Q9Y617 370 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 MYBPHLA2RUH7 354 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 YJEFN3A6XGL0 299 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 E7ENQ6 273 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 EEF2KO00418 725 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 LYPLA1O75608 230 aaPredicted RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 AP1G2O75843 785 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 AMHP03971 560 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 ENO1P06733 434 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 TPH1P17752 444 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PGGT1BP53609 377 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 KDSRQ06136 332 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 WASHC5Q12768 1159 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 NAA25Q14CX7 972 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 RASA2Q15283 850 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 SV2CQ496J9 727 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 UBXN11Q5T124 520 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 KIAA0319Q5VV43 1072 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 ALKAL1Q6UXT8 129 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 DSTYKQ6XUX3 929 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 SMG8Q8ND04 991 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 AGR3Q8TD06 166 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 USP33Q8TEY7 942 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 AZIN2Q96A70 460 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 CELF6Q96J87 481 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PARK7Q99497 189 aaKnown RBP9.01□□□□□ -0.97
LINC00558-201ENST00000569422 C20orf27Q9GZN8 174 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 NMUR2Q9GZQ4 415 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 TXNDC16Q9P2K2 825 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 FETUBQ9UGM5 382 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 PLLPQ9Y342 182 aa9.01□□□□□ -0.97
LINC00558-201ENST00000569422 SMIM35A0A1B0GVV1 85 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 HMX2A2RU54 273 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DCAF8L1A6NGE4 600 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 GLTPD2A6NH11 291 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 GYG2O15488 501 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SPAG6O75602 509 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 F2P00734 622 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SRGAP2BP0DMP2 458 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ESRRAP11474 423 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 ZFXP17010 805 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 NPR3P17342 541 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 GM2AP17900 193 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CLCNKBP51801 687 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CACNA2D1P54289 1103 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 AQP5P55064 265 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SLC18A2Q05940 514 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 PRKD1Q15139 912 aaPredicted RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 SLC25A52Q3SY17 297 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CES4AQ5XG92 561 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CLEC20AQ6ZU45 233 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 GPRIN1Q7Z2K8 1008 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 KDELC2Q7Z4H8 507 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ZDHHC17Q8IUH5 632 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CRYBG2Q8N1P7 616 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 OR52K1Q8NGK4 314 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 MCUR1Q96AQ8 359 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 QKIQ96PU8 341 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00558-201ENST00000569422 NUDCD1Q96RS6 583 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SHCBP1LQ9BZQ2 653 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SIK2Q9H0K1 926 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 AP5M1Q9H0R1 490 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 KCNK13Q9HB14 408 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ANLNQ9NQW6 1124 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF358Q9NW07 568 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DDIT4Q9NX09 232 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 SYBUQ9NX95 663 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 NOP53Q9NZM5 478 aaKnown RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 FZD10Q9ULW2 581 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 A0A0A0MRY4 1105 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 DYTNA2CJ06 578 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 C17orf102A2RUQ5 167 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 PTGESO14684 152 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 XPOTO43592 962 aaKnown RBP9□□□□□ -0.97
LINC00558-201ENST00000569422 GCATO75600 419 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 C1QAP02745 245 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ENPP1P22413 925 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 CCND1P24385 295 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 ACADSBP45954 432 aa9□□□□□ -0.97
LINC00558-201ENST00000569422 RASSF2P50749 326 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms