RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 TKTL2Q9H0I9 626 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 MTG2Q9H4K7 406 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 PIGVQ9NUD9 493 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 MARK1Q9P0L2 795 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 MYO1AQ9UBC5 1043 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC12A6Q9UHW9 1150 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 MMP17Q9ULZ9 603 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 A0A1W2PQC6 194 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 TYW5A2RUC4 315 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 KCNU1A8MYU2 1149 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 F5H5T6 163 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 H0Y626 953 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 APBB3O95704 486 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 LSM8O95777 96 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 PENKP01210 267 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 LMNAP02545 664 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 GLI1P08151 1106 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 PLEKP08567 350 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 TDGF1P13385 188 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 PDGFRAP16234 1089 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 HLA-FP30511 346 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 CCR1P32246 355 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 EIF2DP41214 584 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 MATKP42679 507 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 GABRB2P47870 512 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 NRLP54845 237 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 MRPS21P82921 87 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 RING1Q06587 406 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 KLHL30Q0D2K2 578 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 LMAN2Q12907 356 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 CDH18Q13634 790 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 CRY1Q16526 586 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 PREPLQ4J6C6 727 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 FNDC3BQ53EP0 1204 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 EOGTQ5NDL2 527 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 OTUD1Q5VV17 481 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 TMEM215Q68D42 235 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 SCYL2Q6P3W7 929 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 ARMCX6Q7L4S7 300 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 ZNF571Q7Z3V5 609 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 ANKS1BQ7Z6G8 1248 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 LONP2Q86WA8 852 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 CCDC117Q8IWD4 279 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 KIAA1958Q8N8K9 716 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 HJURPQ8NCD3 748 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 MDGA1Q8NFP4 955 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 IGSF8Q969P0 613 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 WDCPQ9H6R7 721 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 POLMQ9NP87 494 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 CD93Q9NPY3 652 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 NCDNQ9UBB6 729 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 GGA2Q9UJY4 613 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 SMG5Q9UPR3 1016 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 HS3ST4Q9Y661 456 aa9.34□□□□□ -0.91
GTF3C1-210ENST00000569394 EML5Q05BV3 1969 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 RPP40O75818 363 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 IGLV3-25P01717 112 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 EPHX1P07099 455 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 C7P10643 843 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 PABPC1P11940 636 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 KRT3P12035 628 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 POLR2EP19388 210 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 MMP8P22894 467 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 RRM1P23921 792 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 PRKCHP24723 683 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 NTSR1P30989 418 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 SDC4P31431 198 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 CASP14P31944 242 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 RFC1P35251 1148 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 IL12RB1P42701 662 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 AUHQ13825 339 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ZNF234Q14588 700 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ZNF528Q3MIS6 628 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 CCDC14Q49A88 953 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 MBLAC2Q68D91 279 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ACAD10Q6JQN1 1059 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 FBXL22Q6P050 247 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 DNAJC24Q6P3W2 148 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 KIAA1324Q6UXG2 1013 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 SERPINA13PQ6UXR4 307 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 TRIM72Q6ZMU5 477 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 TFAP2DQ7Z6R9 452 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 KBTBD6Q86V97 674 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ZDHHC17Q8IUH5 632 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 FAM217AQ8IXS0 508 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 KIAA2013Q8IYS2 634 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 APCDD1Q8J025 514 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms