RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 RFX8Q6ZV50 586 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 CIR1Q86X95 450 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-211ENST00000569380 MAP7D3Q8IWC1 876 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 ZNF683Q8IZ20 524 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 PRELID2Q8N945 189 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 SPATA4Q8NEY3 305 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 BTN2A3PQ96KV6 586 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 PRMT1Q99873 361 aaKnown RBP21.08■□□□□ 0.97
SPSB3-211ENST00000569380 ZNF670Q9BS34 389 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 ARHGEF4Q9NR80 690 aa21.08■□□□□ 0.97
SPSB3-211ENST00000569380 E9PAM4 449 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 LEFTY2O00292 366 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 KRIT1O00522 736 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 ZNF197O14709 1029 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 SGSHP51688 502 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 KPNA1P52294 538 aaPredicted RBP21.08■□□□□ 0.96
SPSB3-211ENST00000569380 VCPP55072 806 aaKnown RBP21.08■□□□□ 0.96
SPSB3-211ENST00000569380 MLLT6P55198 1093 aaPredicted RBP21.08■□□□□ 0.96
SPSB3-211ENST00000569380 TPI1P60174 286 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 AUHQ13825 339 aaKnown RBP21.08■□□□□ 0.96
SPSB3-211ENST00000569380 TUBB2AQ13885 445 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 DPYSQ14117 519 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 MANEALQ5VSG8 457 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 NUGGCQ68CJ6 796 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 C1orf228Q6PIY5 440 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 NPAS3Q8IXF0 933 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 TP53INP2Q8IXH6 220 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 NOA1Q8NC60 698 aaKnown RBP21.08■□□□□ 0.96
SPSB3-211ENST00000569380 IGSF8Q969P0 613 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 TUBB2BQ9BVA1 445 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 ADAM7Q9H2U9 754 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 MPP6Q9NZW5 540 aa21.08■□□□□ 0.96
SPSB3-211ENST00000569380 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.07■□□□□ 0.96
SPSB3-211ENST00000569380 H3BRJ5 948 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 ACSL4O60488 711 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 AVPR1AP37288 418 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 ARL4AP40617 200 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 HARS2P49590 506 aaKnown RBP21.07■□□□□ 0.96
SPSB3-211ENST00000569380 CKAP4Q07065 602 aaKnown RBP21.07■□□□□ 0.96
SPSB3-211ENST00000569380 RWDD4Q6NW29 188 aaKnown RBP21.07■□□□□ 0.96
SPSB3-211ENST00000569380 FBXL22Q6P050 247 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 CHSY1Q86X52 802 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 UNC45BQ8IWX7 931 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 PLD5Q8N7P1 536 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 SH3RF2Q8TEC5 729 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 P2RY11Q96G91 374 aa21.07■□□□□ 0.96
SPSB3-211ENST00000569380 CLUHO75153 1309 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 TSPAN3O60637 253 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 TACR2P21452 398 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 EPHB2P29323 1055 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 SNX1Q13596 522 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 NCBP2-AS2Q69YL0 99 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 BBS12Q6ZW61 710 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 ZNF572Q7Z3I7 529 aaPredicted RBP21.06■□□□□ 0.96
SPSB3-211ENST00000569380 ARID3BQ8IVW6 561 aaPredicted RBP21.06■□□□□ 0.96
SPSB3-211ENST00000569380 KLHL7Q8IXQ5 586 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 CFAP52Q8N1V2 620 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 ZSCAN18Q8TBC5 510 aaPredicted RBP21.06■□□□□ 0.96
SPSB3-211ENST00000569380 FGF13Q92913 245 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 RSPRY1Q96DX4 576 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 MSLNLQ96KJ4 702 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 MAK16Q9BXY0 300 aaKnown RBP21.06■□□□□ 0.96
SPSB3-211ENST00000569380 C10orf88Q9H8K7 445 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 RNF14Q9UBS8 474 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.06■□□□□ 0.96
SPSB3-211ENST00000569380 ARHGAP26Q9UNA1 814 aa21.06■□□□□ 0.96
SPSB3-211ENST00000569380 V9GYY5 206 aaPredicted RBP21.06■□□□□ 0.96
SPSB3-211ENST00000569380 C5orf42Q9H799 3197 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 CNTN5O94779 1100 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 ERCC2P18074 760 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 DDX6P26196 483 aaKnown RBP eCLIP21.05■□□□□ 0.962e-6■■■■□ 26.3
SPSB3-211ENST00000569380 CETN2P41208 172 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 SLC10A2Q12908 348 aaPredicted RBP21.05■□□□□ 0.96
SPSB3-211ENST00000569380 ALFQ53S48 1182 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 TTC27Q6P3X3 843 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 Q6ZNB5 142 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 LGI2Q8N0V4 545 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.05■□□□□ 0.96
SPSB3-211ENST00000569380 HLA-CQ95604 372 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 LRRC3BQ96PB8 259 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 EPAS1Q99814 870 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 DDX47Q9H0S4 455 aaKnown RBP21.05■□□□□ 0.96
SPSB3-211ENST00000569380 NDFIP2Q9NV92 336 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 SLC12A6Q9UHW9 1150 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 CTAGE15A4D2H0 777 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 H3BQ06 376 aaPredicted RBP21.05■□□□□ 0.96
SPSB3-211ENST00000569380 APOL1O14791 398 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 DCLK1O15075 740 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 DAPK3O43293 454 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 CTAGE8P0CG41 777 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 HOXB8P17481 243 aaPredicted RBP21.05■□□□□ 0.96
SPSB3-211ENST00000569380 GBE1Q04446 702 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 COL19A1Q14993 1142 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 SLC9A4Q6AI14 798 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 CTAGE6Q86UF2 777 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 BBS7Q8IWZ6 715 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 CTAGE4Q8IX94 777 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 NPWQ8N729 165 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 CEP112Q8N8E3 955 aa21.05■□□□□ 0.96
SPSB3-211ENST00000569380 PABPC5Q96DU9 382 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms