RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CYB5D2Q8WUJ1 264 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 AZIN2Q96A70 460 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 RSPH9Q9H1X1 276 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 HPSEQ9Y251 543 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 MUC22E2RYF6 1773 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 APC2O95996 2303 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 A0A1B0GTQ1 180 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 A0A1W2PPC4 97 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 TYW5A2RUC4 315 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 SLC11A2P49281 568 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 ARID5BQ14865 1188 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 MSANTD2Q6P1R3 559 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 NXPE2Q96DL1 559 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 DDX50Q9BQ39 737 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 SLCO1B1Q9Y6L6 691 aa16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 COL5A1P20908 1838 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-215ENST00000568676 A0A1B0GVL5 298 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 IGHV4-34P06331 123 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 EPB41P11171 864 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 SYKP43405 635 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 ABCG1P45844 678 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 DNM1Q05193 864 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 ADIGQ0VDE8 80 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 GOLGA7BQ2TAP0 167 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 ZCWPW2Q504Y3 356 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 C6orf118Q5T5N4 469 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 PIK3R6Q5UE93 754 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 ZNF366Q8N895 744 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 IRGQQ8WZA9 623 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 TTC17Q96AE7 1141 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 UBL7Q96S82 380 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 ELF4Q99607 663 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 ORAI3Q9BRQ5 295 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 PABPC3Q9H361 631 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 SFMBT1Q9UHJ3 866 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 FZD4Q9ULV1 537 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
HERPUD1-215ENST00000568676 FAM237AA0A1B0GTK4 181 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 LRRC72A6NJI9 287 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 YJEFN3A6XGL0 299 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 E7ENQ6 273 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 TK2O00142 265 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 CETN3O15182 167 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 IGLV3-27P01718 113 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 VDRP11473 427 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 DPYDQ12882 1025 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 CUL2Q13617 745 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 HNRNPA1L2Q32P51 320 aaKnown RBP16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 DHRS13Q6UX07 377 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 MFN1Q8IWA4 741 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 CCDC117Q8IWD4 279 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 HJURPQ8NCD3 748 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 FIBINQ8TAL6 211 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 EDEM1Q92611 657 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 CCDC34Q96HJ3 373 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 FBXL12Q9NXK8 326 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 ADAMTS1Q9UHI8 967 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 LOC400499M0QZD8 3231 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 CELSR3Q9NYQ7 3312 aa16.37■□□□□ 0.21
HERPUD1-215ENST00000568676 IGSF10Q6WRI0 2623 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 TARSL2A2RTX5 802 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 TULP2O00295 520 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 ENC1O14682 589 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 ACSL4O60488 711 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 TBL1XO60907 577 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 ABCB4P21439 1286 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 TBXAS1P24557 533 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 CD70P32970 193 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 ARRB1P49407 418 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 CCR5P51681 352 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 GALCP54803 685 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 DAOAP59103 153 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 OXR1Q8N573 874 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 OR2T34Q8NGX1 318 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 GANCQ8TET4 914 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 TATDN2Q93075 761 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 BBC3Q96PG8 261 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 GDF3Q9NR23 364 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 MAPK8IP1Q9UQF2 711 aa16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 URB1O60287 2271 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-215ENST00000568676 CABIN1Q9Y6J0 2220 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 SMG1Q96Q15 3661 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 FAM149AA5PLN7 773 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 KCNK3O14649 394 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 RFPL3O75679 317 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 MOCS3O95396 460 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 LDOC1O95751 146 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 ITGAVP06756 1048 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 SRPRAP08240 638 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 JUPP14923 745 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 CD19P15391 556 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 CD38P28907 300 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 ILKQ13418 452 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 NNTQ13423 1086 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms