RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 COQ4Q9Y3A0 265 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 DNTTP04053 509 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 DLDP09622 509 aaKnown RBP16.15■□□□□ 0.18
NME3-211ENST00000568561 SETSIPP0DME0 302 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 VDRP11473 427 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 IL9RQ01113 521 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 PKDCCQ504Y2 493 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 CCDC157Q569K6 752 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 FAM133BQ5BKY9 247 aaKnown RBP16.15■□□□□ 0.18
NME3-211ENST00000568561 KCNT1Q5JUK3 1230 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 PMF1Q6P1K2 205 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 TMEM270Q6UE05 265 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 KIAA0907Q7Z7F0 614 aaPredicted RBP16.15■□□□□ 0.18
NME3-211ENST00000568561 KCTD13Q8WZ19 329 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 KAT5Q92993 513 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 MYEOVQ96EZ4 313 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 PRICKLE1Q96MT3 831 aaPredicted RBP16.15■□□□□ 0.18
NME3-211ENST00000568561 TSG101Q99816 390 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 SCAND2PQ9GZW5 306 aaPredicted RBP16.15■□□□□ 0.18
NME3-211ENST00000568561 BTBD1Q9H0C5 482 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 PCED1AQ9H1Q7 454 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 CCDC86Q9H6F5 360 aaKnown RBP16.15■□□□□ 0.18
NME3-211ENST00000568561 CNGB3Q9NQW8 809 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 GPSM3Q9Y4H4 160 aa16.15■□□□□ 0.18
NME3-211ENST00000568561 M0QYV0 167 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 FLRT2O43155 660 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 LATS1O95835 1130 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 IGLV3-27P01718 113 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 BRD2P25440 801 aaKnown RBP16.14■□□□□ 0.17
NME3-211ENST00000568561 ZNF445P59923 1031 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.17
NME3-211ENST00000568561 PIK3R6Q5UE93 754 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 NADSYN1Q6IA69 706 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 MSANTD2Q6P1R3 559 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 SERGEFQ9UGK8 458 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
NME3-211ENST00000568561 ANKRD6Q9Y2G4 727 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 PCDHB4Q9Y5E5 795 aa16.14■□□□□ 0.17
NME3-211ENST00000568561 FAM47DPA6NHR8 397 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 H0Y8X5 98 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 LTFP02788 710 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 ATP5BP06576 529 aaKnown RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 POLR2EP19388 210 aaKnown RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 GRIA4P48058 902 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 NUMBP49757 651 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 TBX4P57082 545 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 RPS24P62847 133 aaKnown RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 FKBP3Q00688 224 aaKnown RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 TEAD4Q15561 434 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 COL28A1Q2UY09 1125 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 ZNF658Q5TYW1 1059 aaPredicted RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 ZNF776Q68DI1 518 aaPredicted RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 MMS22LQ6ZRQ5 1243 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 MFN1Q8IWA4 741 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 FMR1NBQ8N0W7 255 aaPredicted RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 GANCQ8TET4 914 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 MYO19Q96H55 970 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 ORAI3Q9BRQ5 295 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 MIS12Q9H081 205 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 RMND1Q9NWS8 449 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 RAXQ9Y2V3 346 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 PCDHGB2Q9Y5G2 931 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 LOC400499M0QZD8 3231 aa16.13■□□□□ 0.17
NME3-211ENST00000568561 SMG1Q96Q15 3661 aaKnown RBP16.13■□□□□ 0.17
NME3-211ENST00000568561 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 RNF225M0QZC1 329 aaPredicted RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 ACSL4O60488 711 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 SIN3BO75182 1162 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 TBXAS1P24557 533 aaPredicted RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 CD27P26842 260 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 CSKP41240 450 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 SLC11A2P49281 568 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 FMO5P49326 533 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 NUGGCQ68CJ6 796 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 DBX2Q6ZNG2 339 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 SCML4Q8N228 414 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 PPM1KQ8N3J5 372 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 CARNMT1Q8N4J0 409 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 HJURPQ8NCD3 748 aaPredicted RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 ADAM32Q8TC27 787 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 SLC35F5Q8WV83 523 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 LMLNQ96KR4 655 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 NT5C1BQ96P26 610 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 CDC6Q99741 560 aa16.12■□□□□ 0.17
NME3-211ENST00000568561 NUCKS1Q9H1E3 243 aaKnown RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 KIAA1522Q9P206 1035 aaPredicted RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 INTS6Q9UL03 887 aaKnown RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 URB1O60287 2271 aaKnown RBP16.12■□□□□ 0.17
NME3-211ENST00000568561 GCN1Q92616 2671 aaKnown RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 MOCS2O96007 188 aaPredicted RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 PAEPP09466 180 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 CTSOP43234 321 aaPredicted RBP16.11■□□□□ 0.17
NME3-211ENST00000568561 CTSKP43235 329 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 CCT8P50990 548 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 ZBTB16Q05516 673 aa16.11■□□□□ 0.17
NME3-211ENST00000568561 FSCBQ5H9T9 825 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms