RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CHSY1Q86X52 802 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 TRIM42Q8IWZ5 723 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 LENG1Q96BZ8 264 aaPredicted RBP9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 TUBB6Q9BUF5 446 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 SIK2Q9H0K1 926 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 NXF3Q9H4D5 531 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 CYP4F12Q9HCS2 524 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 IARS2Q9NSE4 1012 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 SETD4Q9NVD3 440 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 THAP1Q9NVV9 213 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 M0QYT0 321 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 TK2O00142 265 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 TRAFD1O14545 582 aaPredicted RBP9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 NDC80O14777 642 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 B4GALT4O60513 344 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 PFKMP08237 780 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 SRGAP2BP0DMP2 458 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 IGFBP6P24592 240 aaPredicted RBP9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 RXRBP28702 533 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 ADCYAP1R1P41586 468 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 CXCR3P49682 368 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 CYTH1Q15438 398 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 BOLA3Q53S33 107 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 SLC7A14Q8TBB6 771 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 FAM167AQ96KS9 214 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 ZMAT2Q96NC0 199 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 LHX5Q9H2C1 402 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 TASP1Q9H6P5 420 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 PPCSQ9HAB8 311 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 CNTN3Q9P232 1028 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 ADAMTS6Q9UKP5 1117 aa9.21□□□□□ -0.94
HDGFL3-206ENST00000568294 TMEM233B4DJY2 109 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 GSTT1P30711 240 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 GNL1P36915 607 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CCNFP41002 786 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 POU5F1BQ06416 359 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SEPT6Q14141 434 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 DNAL1Q4LDG9 190 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 TEX44Q53QW1 395 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CELF3Q5SZQ8 465 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 RWDD4Q6NW29 188 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SATL1Q86VE3 508 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SNX32Q86XE0 403 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF354CQ86Y25 554 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF398Q8TD17 642 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 P2RY11Q96G91 374 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 OR52B2Q96RD2 323 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SH3GL3Q99963 347 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SEMA6AQ9H2E6 1030 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 C20orf96Q9NUD7 363 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 DDX18Q9NVP1 670 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 NUDT5Q9UKK9 219 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 C19orf81C9J6K1 198 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CSPG5O95196 566 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CDH5P33151 784 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 GK3PQ14409 553 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 TRMT5Q32P41 509 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 TEDDM1Q5T9Z0 273 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 MAVSQ7Z434 540 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SPATA24Q86W54 205 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 OR6Y1Q8NGX8 325 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 COG4Q9H9E3 785 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 COPS7BQ9H9Q2 264 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SNX15Q9NRS6 342 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 NME7Q9Y5B8 376 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 PCDHA11Q9Y5I1 949 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 KIAA1217Q5T5P2 1943 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SDR42E2A6NKP2 422 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 C9JVG2 144 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 E7ENQ6 273 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CLGNO14967 610 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 HNRNPCL1O60812 293 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 FGF3P11487 239 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CPA3P15088 417 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CALRP27797 417 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 L1CAMP32004 1257 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ABCD1P33897 745 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 PTPN7P35236 360 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 IDH3AP50213 366 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SLC18A1P54219 525 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CACNB2Q08289 660 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 MED21Q13503 144 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 OR52E8Q6IFG1 317 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 SH2D5Q6ZV89 423 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 HFE2Q6ZVN8 426 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ZBTB46Q86UZ6 589 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 MCUQ8NE86 351 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CHST13Q8NET6 341 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 MAPK15Q8TD08 544 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 FNIP1Q8TF40 1166 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 ZBED3Q96IU2 234 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 CCDC106Q9BWC9 280 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 BCO2Q9BYV7 579 aa9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 PRMT7Q9NVM4 692 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-206ENST00000568294 GTSE1Q9NYZ3 720 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms