RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 VCPIP1Q96JH7 1222 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-213ENST00000568158 IER2Q9BTL4 223 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 SLC2A11Q9BYW1 496 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 MAGEB5Q9BZ81 275 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 PRMT8Q9NR22 394 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-213ENST00000568158 ARHGEF38Q9NXL2 777 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 SLC27A6Q9Y2P4 619 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-213ENST00000568158 HS3ST4Q9Y661 456 aa13.47□□□□□ -0.25
CNOT1-213ENST00000568158 KIAA1549LQ6ZVL6 1849 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 A0A087X0T9 212 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 SGK1O00141 431 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 FAM228BP0C875 321 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 TDGF1P13385 188 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 GPD1P21695 349 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 SDC4P31431 198 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 EIF4A3P38919 411 aaKnown RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 PXNP49023 591 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 TBX2Q13207 712 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 TRIM14Q14142 442 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 DMC1Q14565 340 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 BRMS1LQ5PSV4 323 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 PPP1R15BQ5SWA1 713 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 MPP7Q5T2T1 576 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 TMEM215Q68D42 235 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 HEATR6Q6AI08 1181 aaKnown RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 FBXL22Q6P050 247 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 FAM131BQ86XD5 332 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-213ENST00000568158 IL17RCQ8NAC3 791 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 IGSF8Q969P0 613 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 ACOX2Q99424 681 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 CHP1Q99653 195 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 IRF2BPLQ9H1B7 796 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 ISCUQ9H1K1 167 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 MYO1AQ9UBC5 1043 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 SLC8A2Q9UPR5 921 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 R4GN57 208 aa13.46□□□□□ -0.25
CNOT1-213ENST00000568158 WASH3PC4AMC7 463 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 F5H5T6 163 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 HNRNPLP14866 589 aaKnown RBP eCLIP13.45□□□□□ -0.269e-8■□□□□ 9.2
CNOT1-213ENST00000568158 HLA-FP30511 346 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 CD70P32970 193 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 RDXP35241 583 aaKnown RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 PTPN9P43378 593 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 FNTBP49356 437 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 IRAK1P51617 712 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF75DP51815 510 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 OGDHQ02218 1023 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 MAMLD1Q13495 774 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 DCUN1D2Q6PH85 259 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 SYT13Q7L8C5 426 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 KIAA0907Q7Z7F0 614 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 HJURPQ8NCD3 748 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 FIBINQ8TAL6 211 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 SORCS1Q8WY21 1168 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 CENPIQ92674 756 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 MCEEQ96PE7 176 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 ABCB8Q9NUT2 735 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 ELOVL2Q9NXB9 296 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 CNOT8Q9UFF9 292 aaKnown RBP13.45□□□□□ -0.26
CNOT1-213ENST00000568158 VANGL2Q9ULK5 521 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 MMP17Q9ULZ9 603 aa13.45□□□□□ -0.26
CNOT1-213ENST00000568158 AKR1B15C9JRZ8 316 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-213ENST00000568158 H0Y626 953 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 CCP110O43303 1012 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 ADAM23O75077 832 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 PAPSS2O95340 614 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-213ENST00000568158 TPM1P09493 284 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 ADRA1BP35368 520 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 HDAC4P56524 1084 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 ARID5BQ14865 1188 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 CCDC122Q5T0U0 273 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 RNF43Q68DV7 783 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 PPP1R2P3Q6NXS1 205 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 STRADAQ7RTN6 431 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 VPS36Q86VN1 386 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 FAM172AQ8WUF8 416 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 NELL1Q92832 810 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF653Q96CK0 615 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms