RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 C18orf8Q96DM3 657 aa26.1■■□□□ 1.77
FANCA-228ENST00000567943 LMLNQ96KR4 655 aa26.1■■□□□ 1.77
FANCA-228ENST00000567943 FAM204AQ9H8W3 233 aa26.1■■□□□ 1.77
FANCA-228ENST00000567943 CD93Q9NPY3 652 aa26.1■■□□□ 1.77
FANCA-228ENST00000567943 BCLAF3A2AJT9 711 aaKnown RBP26.09■■□□□ 1.77
FANCA-228ENST00000567943 TBL1XO60907 577 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 MOCS2O96007 188 aaPredicted RBP26.09■■□□□ 1.77
FANCA-228ENST00000567943 GABRB2P47870 512 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 ATXN1P54253 815 aaKnown RBP26.09■■□□□ 1.77
FANCA-228ENST00000567943 FMO1Q01740 532 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 ARID5AQ03989 594 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 ZNF234Q14588 700 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 EIF4HQ15056 248 aaKnown RBP26.09■■□□□ 1.77
FANCA-228ENST00000567943 C2CD6Q53TS8 623 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 MPP7Q5T2T1 576 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 ADIPOR2Q86V24 386 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 MRGPRX1Q96LB2 322 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 IRX2Q9BZI1 471 aaPredicted RBP26.09■■□□□ 1.77
FANCA-228ENST00000567943 ABCB8Q9NUT2 735 aa26.09■■□□□ 1.77
FANCA-228ENST00000567943 SYNJ2BP-COX16A0A087WUM0 186 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.08■■□□□ 1.77
FANCA-228ENST00000567943 DAB1O75553 588 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 APOEP02649 317 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 PRKCHP24723 683 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 CD70P32970 193 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 RPS24P62847 133 aaKnown RBP26.08■■□□□ 1.77
FANCA-228ENST00000567943 TPM4P67936 248 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 CREB5Q02930 508 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 FUT11Q495W5 492 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 MS4A13Q5J8X5 152 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 TCEAL6Q6IPX3 200 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 MSANTD4Q8NCY6 345 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 ZNF397Q8NF99 534 aaPredicted RBP26.08■■□□□ 1.77
FANCA-228ENST00000567943 TCEAL3Q969E4 200 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 NAP1L5Q96NT1 182 aaPredicted RBP26.08■■□□□ 1.77
FANCA-228ENST00000567943 DDX50Q9BQ39 737 aaKnown RBP26.08■■□□□ 1.77
FANCA-228ENST00000567943 CIPCQ9C0C6 399 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 DDIT4Q9NX09 232 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 COX16Q9P0S2 106 aa26.08■■□□□ 1.77
FANCA-228ENST00000567943 A0A1B0GTH6 734 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 NPC1O15118 1278 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 SERPINC1P01008 464 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 CYP1A1P04798 512 aaPredicted RBP26.07■■□□□ 1.76
FANCA-228ENST00000567943 PI4KAP42356 2102 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 RNASE9P60153 205 aaKnown RBP26.07■■□□□ 1.76
FANCA-228ENST00000567943 FAM102AQ5T9C2 384 aaPredicted RBP26.07■■□□□ 1.76
FANCA-228ENST00000567943 XYLT1Q86Y38 959 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 SPACA7Q96KW9 195 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 ADAM33Q9BZ11 813 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 MKRN2Q9H000 416 aaKnown RBP26.07■■□□□ 1.76
FANCA-228ENST00000567943 STIM2Q9P246 746 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 GGA2Q9UJY4 613 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 SPTBN2O15020 2390 aa26.07■■□□□ 1.76
FANCA-228ENST00000567943 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 KCNU1A8MYU2 1149 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 TIMM44O43615 452 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 CAVIN2O95810 425 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 PABPC1P11940 636 aaKnown RBP26.06■■□□□ 1.76
FANCA-228ENST00000567943 NOS2P35228 1153 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 PTGER3P43115 390 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 PTPRNQ16849 979 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 OTUD1Q5VV17 481 aaPredicted RBP26.06■■□□□ 1.76
FANCA-228ENST00000567943 CHST9Q7L1S5 443 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 TMEFF1Q8IYR6 380 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 CFAP52Q8N1V2 620 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 HJURPQ8NCD3 748 aaPredicted RBP26.06■■□□□ 1.76
FANCA-228ENST00000567943 CYB5D2Q8WUJ1 264 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 UCMAQ8WVF2 138 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 VPS45Q9NRW7 570 aa26.06■■□□□ 1.76
FANCA-228ENST00000567943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.06■■□□□ 1.76
FANCA-228ENST00000567943 CDV3Q9UKY7 258 aaKnown RBP26.06■■□□□ 1.76
FANCA-228ENST00000567943 IGHV1OR15-9A0A0B4J2B8 117 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 GOLGA8SH3BPF8 625 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 MATKP42679 507 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 TRIM72Q6ZMU5 477 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 ERMP1Q7Z2K6 904 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 FIBINQ8TAL6 211 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 NETO1Q8TDF5 533 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 WFIKKN2Q8TEU8 576 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 RNF34Q969K3 372 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 PCDHB18PQ96TA0 734 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 TMEM245Q9H330 911 aa26.05■■□□□ 1.76
FANCA-228ENST00000567943 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.05■■□□□ 1.76
FANCA-228ENST00000567943 A0A1W2PQC6 194 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 GOLGA6L19H0YKK7 550 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 SCNN1AP37088 669 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 DHPSP49366 369 aaPredicted RBP26.04■■□□□ 1.76
FANCA-228ENST00000567943 COPAP53621 1224 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 NME3Q13232 169 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 FSCBQ5H9T9 825 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 RAP1GAP2Q684P5 730 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 MMS22LQ6ZRQ5 1243 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 DGLUCYQ7Z3D6 616 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 ATP6V0D2Q8N8Y2 350 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 SLC30A5Q8TAD4 765 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 BTN2A3PQ96KV6 586 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 PRMT1Q99873 361 aaKnown RBP26.04■■□□□ 1.76
FANCA-228ENST00000567943 SLC12A6Q9UHW9 1150 aa26.04■■□□□ 1.76
FANCA-228ENST00000567943 INTS6Q9UL03 887 aaKnown RBP26.04■■□□□ 1.76
FANCA-228ENST00000567943 CYP8B1Q9UNU6 501 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms