RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 DDX19AQ9NUU7 478 aaKnown RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 FBXL12Q9NXK8 326 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 NCKIPSDQ9NZQ3 722 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 AGAP1Q9UPQ3 857 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 DNM3Q9UQ16 869 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 SNX9Q9Y5X1 595 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 ESPL1Q14674 2120 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 A0A0B4J269 797 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 NEMP2A6NFY4 417 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
CAPN3-216ENST00000567071 MTSS1O43312 755 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 FAM189A1O60320 539 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 CUTAO60888 179 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 ATP2C2O75185 946 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 CYBBP04839 570 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 TGM2P21980 687 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 DGKAP23743 735 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 UBE2HP62256 183 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 SRSF6Q13247 344 aaKnown RBP10.16□□□□□ -0.78
CAPN3-216ENST00000567071 VASH2Q86V25 355 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 OSTM1Q86WC4 334 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 SPATS2Q86XZ4 545 aaKnown RBP10.16□□□□□ -0.78
CAPN3-216ENST00000567071 SLC25A45Q8N413 288 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 LRRC52Q8N7C0 313 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 WBP2Q969T9 261 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 ARRDC3Q96B67 414 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 APOLD1Q96LR9 279 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 OMDQ99983 421 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 ELOVL4Q9GZR5 314 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 GDAP2Q9NXN4 497 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 NLGN3Q9NZ94 848 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 CHORDC1Q9UHD1 332 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-216ENST00000567071 ACSL6Q9UKU0 697 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 SRPRBQ9Y5M8 271 aaKnown RBP10.16□□□□□ -0.78
CAPN3-216ENST00000567071 MED13LQ71F56 2210 aa10.16□□□□□ -0.78
CAPN3-216ENST00000567071 SPENQ96T58 3664 aaKnown RBP10.16□□□□□ -0.78
CAPN3-216ENST00000567071 PP2D1A8MPX8 630 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 GABRDO14764 452 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 PLD2O14939 933 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 NOBOXO60393 691 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 TLR5O60602 858 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 IL18RAPO95256 599 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 ITGB3P05106 788 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 KRT7P08729 469 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 SCP2P22307 547 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 CHKAP35790 457 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 PRPHP41219 470 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 ACOT2P49753 483 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 MAPK7Q13164 816 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 EIF3IQ13347 325 aaKnown RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 STAT4Q14765 748 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 ARL6IP4Q66PJ3 421 aaKnown RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 SHC4Q6S5L8 630 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 DTHD1Q6ZMT9 781 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 DPH6Q7L8W6 267 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 FBXO39Q8N4B4 442 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 MYCBPAPQ8TBZ2 947 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 CACTINQ8WUQ7 758 aaKnown RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 HTR3CQ8WXA8 447 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 SORCS1Q8WY21 1168 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 PCED1BQ96HM7 432 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 RUSC1Q9BVN2 902 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 PABPC3Q9H361 631 aaKnown RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 EBF2Q9HAK2 575 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 ZNF71Q9NQZ8 489 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 LARSQ9P2J5 1176 aaKnown RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 SUN2Q9UH99 717 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 ZNF510Q9Y2H8 683 aa10.15□□□□□ -0.78
CAPN3-216ENST00000567071 MORC2Q9Y6X9 1032 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-216ENST00000567071 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 APCP25054 2843 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 A0A1B0GVL5 298 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 CPED1A4D0V7 1026 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 PMS2P1A4D2B8 440 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 WNT9AO14904 365 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 HCRTO43612 131 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 RNASEH2AO75792 299 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 PENKP01210 267 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 KRT19P08727 400 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 PTMSP20962 102 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 GUCY2CP25092 1073 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 ATP5C1P36542 298 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 NUDT1P36639 197 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 TFAMQ00059 246 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 POU5F1Q01860 360 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 KLRB1Q12918 225 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 ZNF177Q13360 481 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 MDH1BQ5I0G3 518 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 C1QL3Q5VWW1 255 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 ADALQ6DHV7 355 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 RINT1Q6NUQ1 792 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 PRPF39Q86UA1 669 aaKnown RBP10.14□□□□□ -0.79
CAPN3-216ENST00000567071 ZNF366Q8N895 744 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 GALNT11Q8NCW6 608 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 GPT2Q8TD30 523 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 POM121Q96HA1 1249 aa10.14□□□□□ -0.79
CAPN3-216ENST00000567071 PIWIL1Q96J94 861 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms