RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 TRIM16O95361 564 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 EPHX1P07099 455 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 SLC2A3P11169 496 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 PRKCHP24723 683 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 ERCC5P28715 1186 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-212ENST00000566121 GNA15P30679 374 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 ARID5AQ03989 594 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 MS4A13Q5J8X5 152 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 MBLAC2Q68D91 279 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 CHST9Q7L1S5 443 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 ARMCX6Q7L4S7 300 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 BTN2A3PQ96KV6 586 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 ABCB8Q9NUT2 735 aa15.75■□□□□ 0.11
CMTM3-212ENST00000566121 IGF2RP11717 2491 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 TARSL2A2RTX5 802 aaKnown RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 TYW5A2RUC4 315 aaKnown RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 BECN2A8MW95 431 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 C10orf142B7Z368 130 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 TSPAN3O60637 253 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 OPHN1O60890 802 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 SRPRAP08240 638 aaKnown RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 ACADMP11310 421 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 POLR2EP19388 210 aaKnown RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 PON1P27169 355 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 SLC6A4P31645 630 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 EFHC1Q5JVL4 640 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 NADSYN1Q6IA69 706 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 KIAA1324Q6UXG2 1013 aaKnown RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 DBX2Q6ZNG2 339 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 USP30Q70CQ3 517 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 HDDC3Q8N4P3 179 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 CLEC4CQ8WTT0 213 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 MYO19Q96H55 970 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 SLC2A13Q96QE2 648 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 SLC12A6Q9UHW9 1150 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 CYTH4Q9UIA0 394 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 TPX2Q9ULW0 747 aaKnown RBP15.74■□□□□ 0.11
CMTM3-212ENST00000566121 NAALADL1Q9UQQ1 740 aa15.74■□□□□ 0.11
CMTM3-212ENST00000566121 KCNU1A8MYU2 1149 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 TBL1XO60907 577 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 LETM1O95202 739 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 KRT5P13647 590 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 CD59P13987 128 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 SLC9A1P19634 815 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 PLK1P53350 603 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 OXCT1P55809 520 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 BPIFB4P59827 614 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 PDCLQ13371 301 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 HNRNPA1L2Q32P51 320 aaKnown RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 ACBD5Q5T8D3 534 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 TTC39BQ5VTQ0 682 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 SYPL2Q5VXT5 272 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 DPY19L2P1Q6NXN4 242 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 IL27RAQ6UWB1 636 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 ZDHHC17Q8IUH5 632 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 FAM114A1Q8IWE2 563 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 WDTC1Q8N5D0 677 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 ZNF397Q8NF99 534 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 SORCS1Q8WY21 1168 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 NOX5Q96PH1 765 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 PPP1R9BQ96SB3 815 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 MIS12Q9H081 205 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 SLC6A17Q9H1V8 727 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 RSPH9Q9H1X1 276 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 SGK2Q9HBY8 427 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 PRSS16Q9NQE7 514 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 ST7Q9NRC1 585 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 RRN3Q9NYV6 651 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 KIAA1522Q9P206 1035 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-212ENST00000566121 PCDHGB2Q9Y5G2 931 aa15.73■□□□□ 0.11
CMTM3-212ENST00000566121 AKAP13Q12802 2813 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 ITIH6Q6UXX5 1313 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 E5RJQ4 531 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 CAPN9O14815 690 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 TRUB2O95900 331 aaKnown RBP15.72■□□□□ 0.11
CMTM3-212ENST00000566121 APOEP02649 317 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 CFIP05156 583 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 CD70P32970 193 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 SCNN1AP37088 669 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 SGSHP51688 502 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 RPS14P62263 151 aaKnown RBP15.72■□□□□ 0.11
CMTM3-212ENST00000566121 PTK2Q05397 1052 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 ZNF252P-AS1Q0IIN9 211 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 MAN2A1Q16706 1144 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 C5orf22Q49AR2 442 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 RFWD3Q6PCD5 774 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 TAC4Q86UU9 113 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 MFN1Q8IWA4 741 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 CCDC117Q8IWD4 279 aaPredicted RBP15.72■□□□□ 0.11
CMTM3-212ENST00000566121 FAM71AQ8IYT1 594 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 RGL4Q8IZJ4 473 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 MINDY1Q8N5J2 469 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 FAM149B1Q96BN6 582 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 PRMT1Q99873 361 aaKnown RBP15.72■□□□□ 0.11
CMTM3-212ENST00000566121 GPR174Q9BXC1 333 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 CLSTN2Q9H4D0 955 aa15.72■□□□□ 0.11
CMTM3-212ENST00000566121 INTS6Q9UL03 887 aaKnown RBP15.72■□□□□ 0.11
CMTM3-212ENST00000566121 ANKRD11Q6UB99 2663 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms