RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SYNJ2BP-COX16A0A087WUM0 186 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 PAGE1O75459 146 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 APOEP02649 317 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 IRF1P10914 325 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 MS4A13Q5J8X5 152 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 CCDC70Q6NSX1 233 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 C11orf63Q6NUN7 778 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 YAF2Q8IY57 180 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 ZNF683Q8IZ20 524 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 GJD3Q8N144 294 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 CCDC185Q8N715 623 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 LRRC57Q8N9N7 239 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 TRIM58Q8NG06 486 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 RNF34Q969K3 372 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 ANKZF1Q9H8Y5 726 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 COX16Q9P0S2 106 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 TRIM10Q9UDY6 481 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 FZD10Q9ULW2 581 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 HS3ST4Q9Y661 456 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 SAR1BQ9Y6B6 198 aa13.06□□□□□ -0.32
SF3B3-206ENST00000565990 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 GOLGA6L7A0A1B0GV03 622 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 OTOL1A6NHN0 477 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-206ENST00000565990 DRGXA6NNA5 263 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ASGR2P07307 311 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 SRFP11831 508 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 TCF4P15884 667 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 COMTP21964 271 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 IL1R2P27930 398 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 GDI1P31150 447 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 SLC6A4P31645 630 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
SF3B3-206ENST00000565990 RUNX3Q13761 415 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 AUHQ13825 339 aaKnown RBP13.05□□□□□ -0.32
SF3B3-206ENST00000565990 GRM2Q14416 872 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ARL13BQ3SXY8 428 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 MPP7Q5T2T1 576 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 PIK3R6Q5UE93 754 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 RNF43Q68DV7 783 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 TMEM25Q86YD3 366 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ATP2A3Q93084 1043 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ASIC4Q96FT7 647 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 P2RY11Q96G91 374 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ZFYVE19Q96K21 471 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 DDX50Q9BQ39 737 aaKnown RBP13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ECT2Q9H8V3 914 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 HPS4Q9NQG7 708 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 SPHK2Q9NRA0 654 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 TMPRSS4Q9NRS4 437 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-206ENST00000565990 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 RNF14Q9UBS8 474 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 WNT6Q9Y6F9 365 aa13.05□□□□□ -0.32
SF3B3-206ENST00000565990 TRIOO75962 3097 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 IGLV3-10A0A075B6K4 115 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 GRID2IPA4D2P6 1211 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 BUB1O43683 1085 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 PRPSAP2O60256 369 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 GLULP15104 373 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 TACR2P21452 398 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
SF3B3-206ENST00000565990 L1CAMP32004 1257 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 IFNAR2P48551 515 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 ARSEP51690 589 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 TAS2R40P59535 323 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 DHCR24Q15392 516 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 GAB4Q2WGN9 574 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 POLNQ7Z5Q5 900 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 C14orf80Q86SX3 495 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 CPNE8Q86YQ8 564 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 DNASE1L2Q92874 299 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 CD101Q93033 1021 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 MAGEB5Q9BZ81 275 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 EBF3Q9H4W6 596 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 RETREG1Q9H6L5 497 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 BRD9Q9H8M2 597 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
SF3B3-206ENST00000565990 OR12D3Q9UGF7 316 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 FBXO10Q9UK96 956 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 DUSP12Q9UNI6 340 aa13.04□□□□□ -0.32
SF3B3-206ENST00000565990 MIA3Q5JRA6 1907 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 A0A0A0MRY4 1105 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 SCAMP3O14828 347 aaKnown RBP13.03□□□□□ -0.32
SF3B3-206ENST00000565990 MOCS3O95396 460 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 NFATC1O95644 943 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms