RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 GREM1O60565 184 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 CORO1AP31146 461 aaKnown RBP26.89■■□□□ 1.9
NME3-208ENST00000565379 IFNAR2P48551 515 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 ATP11AP98196 1134 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 DMWDQ09019 674 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 KIF5AQ12840 1032 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 RUNX3Q13761 415 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 C15orf59Q2T9L4 293 aaPredicted RBP26.89■■□□□ 1.9
NME3-208ENST00000565379 OTUD1Q5VV17 481 aaPredicted RBP26.89■■□□□ 1.9
NME3-208ENST00000565379 PKN3Q6P5Z2 889 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 Q6ZNB5 142 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 DCLK2Q8N568 766 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 NIPA2Q8N8Q9 360 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 MSANTD3Q96H12 275 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 DDX50Q9BQ39 737 aaKnown RBP26.89■■□□□ 1.9
NME3-208ENST00000565379 IRX2Q9BZI1 471 aaPredicted RBP26.89■■□□□ 1.9
NME3-208ENST00000565379 PIGVQ9NUD9 493 aa26.89■■□□□ 1.9
NME3-208ENST00000565379 ATG2BQ96BY7 2078 aa26.89■■□□□ 1.89
NME3-208ENST00000565379 CACNA1AO00555 2505 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 SYNJ2BP-COX16A0A087WUM0 186 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 CCDC175P0C221 793 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 CHKAP35790 457 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 AIF1P55008 147 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 OGDHQ02218 1023 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 ARL13BQ3SXY8 428 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 ZBTB44Q8NCP5 570 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 RMDN1Q96DB5 314 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 BTN2A3PQ96KV6 586 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 TSGA10Q9BZW7 698 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 FBRSL1Q9HCM7 1045 aaKnown RBP26.88■■□□□ 1.89
NME3-208ENST00000565379 DUS2Q9NX74 493 aaKnown RBP26.88■■□□□ 1.89
NME3-208ENST00000565379 ARHGEF38Q9NXL2 777 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 COX16Q9P0S2 106 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 STOML2Q9UJZ1 356 aa26.88■■□□□ 1.89
NME3-208ENST00000565379 KCNU1A8MYU2 1149 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 SCAMP3O14828 347 aaKnown RBP26.87■■□□□ 1.89
NME3-208ENST00000565379 TFE3P19532 575 aaPredicted RBP26.87■■□□□ 1.89
NME3-208ENST00000565379 CCINQ13939 588 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 CDO1Q16878 200 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 ZC3H12AQ5D1E8 599 aaKnown RBP26.87■■□□□ 1.89
NME3-208ENST00000565379 FSTL4Q6MZW2 842 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 DENND1CQ8IV53 801 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 ATP2A3Q93084 1043 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 DESI2Q9BSY9 194 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 ZSCAN32Q9NX65 697 aa26.87■■□□□ 1.89
NME3-208ENST00000565379 AGO1Q9UL18 857 aaKnown RBP26.87■■□□□ 1.89
NME3-208ENST00000565379 CEP250Q9BV73 2442 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 KLKB1P03952 638 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 PCK1P35558 622 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 HDAC4P56524 1084 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 IFI16Q16666 785 aaKnown RBP26.86■■□□□ 1.89
NME3-208ENST00000565379 ADAM33Q9BZ11 813 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 LINC00597Q9H2U6 94 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 OSGEPQ9NPF4 335 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 POLR3BQ9NW08 1133 aaPredicted RBP26.86■■□□□ 1.89
NME3-208ENST00000565379 CALCOCO1Q9P1Z2 691 aa26.86■■□□□ 1.89
NME3-208ENST00000565379 ACSL4O60488 711 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 LILRB5O75023 590 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 NFATC1O95644 943 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 MAN1A1P33908 653 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 NOP2P46087 812 aaKnown RBP26.85■■□□□ 1.89
NME3-208ENST00000565379 LRRC32Q14392 662 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 ADGRF1Q5T601 910 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 ZNF662Q6ZS27 426 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 BBS7Q8IWZ6 715 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 FAM217AQ8IXS0 508 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 CPXM2Q8N436 756 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 NTAN1Q96AB6 310 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 HAPLN3Q96S86 360 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 TRIM7Q9C029 511 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 TKTL2Q9H0I9 626 aa26.85■■□□□ 1.89
NME3-208ENST00000565379 PROSCO94903 275 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 ZNF252P-AS1Q0IIN9 211 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 NR1H3Q13133 447 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 EML3Q32P44 896 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 SH3PXD2AQ5TCZ1 1133 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 MAMSTRQ6ZN01 415 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 ADGRG2Q8IZP9 1017 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 SPEM1Q8N4L4 309 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 WBP2Q969T9 261 aa26.84■■□□□ 1.89
NME3-208ENST00000565379 KRT86O43790 486 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 EGFP01133 1207 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 SLC1A1P43005 524 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 CXCL12P48061 93 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 CCR3P51677 355 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 PUM1Q14671 1186 aaKnown RBP eCLIP26.83■■□□□ 1.89
NME3-208ENST00000565379 FAM131BQ86XD5 332 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 CPA6Q8N4T0 437 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 EZH1Q92800 747 aaPredicted RBP26.83■■□□□ 1.89
NME3-208ENST00000565379 C1orf74Q96LT6 269 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 FAM126AQ9BYI3 521 aaPredicted RBP26.83■■□□□ 1.89
NME3-208ENST00000565379 KCNF1Q9H3M0 494 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 ECT2Q9H8V3 914 aa26.83■■□□□ 1.89
NME3-208ENST00000565379 RCCD1A6NED2 376 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 K7ESF4 209 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 PRPSAP2O60256 369 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 GJA4P35212 333 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 ADRA1BP35368 520 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 SCAPQ12770 1279 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 SRSF5Q13243 272 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms