RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TNRC6BQ9UPQ9 1833 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 BCLAF3A2AJT9 711 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 TYW5A2RUC4 315 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 PATE3B3GLJ2 98 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 IRAK2O43187 625 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 SYNCRIPO60506 623 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 EPHX1P07099 455 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 PABPC1P11940 636 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 UCHL3P15374 230 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 PRKCHP24723 683 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 CD70P32970 193 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 PTGER3P43115 390 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 ZNF445P59923 1031 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 RNASE9P60153 205 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 RPL6Q02878 288 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 UBXN1Q04323 297 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 RING1Q06587 406 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 BYSLQ13895 437 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 FUT11Q495W5 492 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 FNDC3BQ53EP0 1204 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 SERPINA13PQ6UXR4 307 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 FAM71AQ8IYT1 594 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 LGI2Q8N0V4 545 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 HJURPQ8NCD3 748 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 PRICKLE1Q96MT3 831 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 ERGIC2Q96RQ1 377 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 DDX50Q9BQ39 737 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 GANQ9H2C0 597 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 NLRC4Q9NPP4 1024 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 VPS45Q9NRW7 570 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 STOML2Q9UJZ1 356 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 PCDHGA5Q9Y5G8 931 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 CKAP5Q14008 2032 aa14.14□□□□□ -0.15
VPS9D1-204ENST00000565023 IGHV1OR15-9A0A0B4J2B8 117 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 GFRA2O00451 464 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 GFPT2O94808 682 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 CYP11B1P15538 503 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 SDHBP21912 280 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 PI4KAP42356 2102 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 BPIFB4P59827 614 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 CDK17Q00537 523 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 NME3Q13232 169 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 SYCP1Q15431 976 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 C2CD6Q53TS8 623 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 MS4A13Q5J8X5 152 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 EFHC1Q5JVL4 640 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 PLA2G2CQ5R387 149 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 MBLAC2Q68D91 279 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 CCDC117Q8IWD4 279 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 WFIKKN2Q8TEU8 576 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 SLC39A13Q96H72 371 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 MRGPRX1Q96LB2 322 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 LHX5Q9H2C1 402 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 RTN4Q9NQC3 1192 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 FAM207AQ9NSI2 230 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 DDIT4Q9NX09 232 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 DAAM1Q9Y4D1 1078 aa14.13□□□□□ -0.15
VPS9D1-204ENST00000565023 A0A1B0GTH6 734 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 GOLGA8SH3BPF8 625 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 HSF2BPO75031 334 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 MMEP08473 750 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 POLR2EP19388 210 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 TACR2P21452 398 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 GGCXP38435 758 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 POLR2FP61218 127 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 TPM4P67936 248 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 SLC6A3Q01959 620 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 LMAN2Q12907 356 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 NNTQ13423 1086 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 CDH18Q13634 790 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 EIF4HQ15056 248 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 LYSMD4Q5XG99 296 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 RNF43Q68DV7 783 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 IL31Q6EBC2 164 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 OLFML1Q6UWY5 402 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 MMS22LQ6ZRQ5 1243 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 NOP9Q86U38 636 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 CIR1Q86X95 450 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 AHI1Q8N157 1196 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 ATP6V0D2Q8N8Y2 350 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 CNTNAP3BQ96NU0 1288 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 RTKNQ9BST9 563 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 EDEM2Q9BV94 578 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 STK33Q9BYT3 514 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 CNTNAP3Q9BZ76 1288 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 MKRN2Q9H000 416 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 TSPY26PQ9H489 355 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 PRDM16Q9HAZ2 1276 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 CD248Q9HCU0 757 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 PLA2G4CQ9UP65 541 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 PKD1L2Q7Z442 2459 aa14.12□□□□□ -0.15
VPS9D1-204ENST00000565023 MUC22E2RYF6 1773 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-204ENST00000565023 F8VZ95 297 aa14.11□□□□□ -0.15
VPS9D1-204ENST00000565023 H0Y626 953 aa14.11□□□□□ -0.15
VPS9D1-204ENST00000565023 GOLGA6L19H0YKK7 550 aa14.11□□□□□ -0.15
VPS9D1-204ENST00000565023 SLC30A4O14863 429 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms