RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 J3QRK9 145 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 KLHL2O95198 593 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 ZFXP17010 805 aaPredicted RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 CDK9P50750 372 aaKnown RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 CYP24A1Q07973 514 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 FLOT2Q14254 428 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 PPP2R5DQ14738 602 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 CCDC92Q53HC0 331 aaPredicted RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 SCARA5Q6ZMJ2 495 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 CDR2LQ86X02 465 aaPredicted RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 SLC7A5P1Q8MH63 180 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 LZTR1Q8N653 840 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 BHLHE22Q8NFJ8 381 aaPredicted RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 FBXL8Q96CD0 374 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 TRIM11Q96F44 468 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 MAML3Q96JK9 1138 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 EPS15L1Q9UBC2 864 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 C3orf70A6NLC5 250 aaPredicted RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 K7EPI3 171 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 KCNA2P16389 499 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 CD247P20963 164 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 NFKBIAP25963 317 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 EIF3EP60228 445 aaKnown RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 PRKCEQ02156 737 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 MMRN1Q13201 1228 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 EML3Q32P44 896 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 KIAA0319LQ8IZA0 1049 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 KLHL32Q96NJ5 620 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 ZNF358Q9NW07 568 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 ZC3H7BQ9UGR2 993 aaKnown RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 BRCA2P51587 3418 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 HLA-DRAP01903 254 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 FGF3P11487 239 aaPredicted RBP16.72■□□□□ 0.27
LINC00554-201ENST00000564841 ARFGAP1Q8N6T3 406 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 EMC1Q8N766 993 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 DDI1Q8WTU0 396 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 FAF2Q96CS3 445 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 HEPHQ9BQS7 1158 aa16.72■□□□□ 0.27
LINC00554-201ENST00000564841 RNASEH2AO75792 299 aaKnown RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 ALDH2P05091 517 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 PSMC3P17980 439 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 PHKA2P46019 1235 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 JAK3P52333 1124 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 GPR162Q16538 588 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 MBLAC2Q68D91 279 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 ZBTB33Q86T24 672 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 TICAM1Q8IUC6 712 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 C10orf107Q8IVU9 208 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 MPP5Q8N3R9 675 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 NLRP7Q8WX94 980 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 ATP2A3Q93084 1043 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 TBCCD1Q9NVR7 557 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 PIH1D1Q9NWS0 290 aaKnown RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 KCND2Q9NZV8 630 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 C6orf203Q9P0P8 240 aaPredicted RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 ACO1P21399 889 aaKnown RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 ADORA2AP29274 412 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 YWHAZP63104 245 aaKnown RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 GCNT1Q02742 428 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 STXBP2Q15833 593 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 SLC9B1Q4ZJI4 515 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 N4BP2L1Q5TBK1 243 aaPredicted RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 TDRD10Q5VZ19 366 aaKnown RBP16.71■□□□□ 0.27
LINC00554-201ENST00000564841 PPP1R2P3Q6NXS1 205 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 MAPK15Q8TD08 544 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 KBTBD7Q8WVZ9 684 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 RSPH1Q8WYR4 309 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 SORT1Q99523 831 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 NEURL2Q9BR09 285 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 RAB6BQ9NRW1 208 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 PLK2Q9NYY3 685 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 EMCNQ9ULC0 261 aa16.71■□□□□ 0.27
LINC00554-201ENST00000564841 LRRIQ4A6NIV6 560 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 OCM2P0CE71 109 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 OCMP0CE72 109 aaPredicted RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 ETFBP38117 255 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 LIG4P49917 911 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 OSTNP61366 133 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 PDAP1Q13442 181 aaKnown RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 LY6KQ17RY6 165 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 PPM1JQ5JR12 505 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 C6orf183Q5T699 404 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 NANOGP8Q6NSW7 305 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 BORAQ6PGQ7 559 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 NIPA1Q7RTP0 329 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 RFX6Q8HWS3 928 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 C4orf19Q8IY42 314 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 OR5B17Q8NGF7 314 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 CMTM5Q96DZ9 223 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 NRDE2Q9H7Z3 1164 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 TXNRD2Q9NNW7 524 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 NEMP1O14524 444 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 ZC3H11AO75152 810 aaKnown RBP eCLIP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms