RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 COL4A2P08572 1712 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 ZDBF2Q9HCK1 2354 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 TRIOO75962 3097 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 H0Y626 953 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 MYO1FO00160 1098 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CCP110O43303 1012 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 TIMM44O43615 452 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CYP1A2P05177 515 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CISD3P0C7P0 127 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 RPS24P62847 133 aaKnown RBP16.52■□□□□ 0.24
RAB40C-208ENST00000564703 ACAP1Q15027 740 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 TTC39BQ5VTQ0 682 aaPredicted RBP16.52■□□□□ 0.24
RAB40C-208ENST00000564703 OTUD1Q5VV17 481 aaPredicted RBP16.52■□□□□ 0.24
RAB40C-208ENST00000564703 FBXL22Q6P050 247 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 BNIPLQ7Z465 357 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 SLFN11Q7Z7L1 901 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 ZNF687Q8N1G0 1237 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CFAP52Q8N1V2 620 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CARNMT1Q8N4J0 409 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 FNIP1Q8TF40 1166 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 UCMAQ8WVF2 138 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 PPP1R9BQ96SB3 815 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 NUP85Q9BW27 656 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 ADAM33Q9BZ11 813 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CHRDQ9H2X0 955 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 IP6K2Q9UHH9 426 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 VANGL2Q9ULK5 521 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 SLC27A6Q9Y2P4 619 aa16.52■□□□□ 0.24
RAB40C-208ENST00000564703 ATG2BQ96BY7 2078 aa16.52■□□□□ 0.23
RAB40C-208ENST00000564703 K7EQS6 105 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 RNF40O75150 1001 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 HOXD9P28356 352 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-208ENST00000564703 MAGEA1P43355 309 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 CXCL12P48061 93 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 SEC13P55735 322 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 OXCT1P55809 520 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 HDAC4P56524 1084 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 MRPS21P82921 87 aaKnown RBP16.51■□□□□ 0.23
RAB40C-208ENST00000564703 CDH18Q13634 790 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 PIGHQ14442 188 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-208ENST00000564703 C2orf27AQ580R0 203 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 SPEM1Q8N4L4 309 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 TERB1Q8NA31 727 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 FIBINQ8TAL6 211 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 KCNV2Q8TDN2 545 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 ANP32BQ92688 251 aaKnown RBP16.51■□□□□ 0.23
RAB40C-208ENST00000564703 PRMT1Q99873 361 aaKnown RBP16.51■□□□□ 0.23
RAB40C-208ENST00000564703 DLGAP2Q9P1A6 1054 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 UVRAGQ9P2Y5 699 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 OR12D3Q9UGF7 316 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 LCMT1Q9UIC8 334 aa16.51■□□□□ 0.23
RAB40C-208ENST00000564703 COL4A3Q01955 1670 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-208ENST00000564703 GFRA2O00451 464 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 TRIM24O15164 1050 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 MOCS3O95396 460 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 TMEM253P0C7T8 217 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 TIE1P35590 1138 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 CCR3P51677 355 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 SGSHP51688 502 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 AIF1P55008 147 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 GSDMDP57764 484 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 ZNF177Q13360 481 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-208ENST00000564703 EFHC2Q5JST6 749 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 ANKS1BQ7Z6G8 1248 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 C1orf210Q8IVY1 113 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 BAG1Q99933 345 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-208ENST00000564703 OSBPL2Q9H1P3 480 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 KIAA1522Q9P206 1035 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-208ENST00000564703 ANAPC7Q9UJX3 599 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 INTUQ9ULD6 942 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 HCN4Q9Y3Q4 1203 aa16.5■□□□□ 0.23
RAB40C-208ENST00000564703 EPN1Q9Y6I3 576 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-208ENST00000564703 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-208ENST00000564703 PRPSAP2O60256 369 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 CLDN11O75508 207 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 LUC7L3O95232 432 aaKnown RBP16.49■□□□□ 0.23
RAB40C-208ENST00000564703 OGDHQ02218 1023 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 MTAPQ13126 283 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 HSF5Q4G112 596 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-208ENST00000564703 RAB6CQ53S08 254 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 TRMT11Q7Z4G4 463 aaKnown RBP16.49■□□□□ 0.23
RAB40C-208ENST00000564703 PHTF2Q8N3S3 785 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 RPLP0P6Q8NHW5 317 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 WFIKKN2Q8TEU8 576 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 NTAN1Q96AB6 310 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 ACDQ96AP0 544 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 PRICKLE1Q96MT3 831 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-208ENST00000564703 RAB6CQ9H0N0 254 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 TMPRSS4Q9NRS4 437 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 ABCB8Q9NUT2 735 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 CLEC4EQ9ULY5 219 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms