RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TTC30AQ86WT1 665 aa4.91□□□□□ -1.62
CHD9-212ENST00000564641 ARL14EPQ8N8R7 260 aaPredicted RBP4.91□□□□□ -1.62
CHD9-212ENST00000564641 B4GALNT2Q8NHY0 566 aa4.91□□□□□ -1.62
CHD9-212ENST00000564641 MSI2Q96DH6 328 aaKnown RBP4.91□□□□□ -1.62
CHD9-212ENST00000564641 NTPCRQ9BSD7 190 aaKnown RBP4.91□□□□□ -1.62
CHD9-212ENST00000564641 PIMREGQ9BSJ6 248 aa4.91□□□□□ -1.62
CHD9-212ENST00000564641 APOL5Q9BWW9 433 aa4.91□□□□□ -1.62
CHD9-212ENST00000564641 VPS33BQ9H267 617 aa4.91□□□□□ -1.62
CHD9-212ENST00000564641 G3BP2Q9UN86 482 aaKnown RBP4.91□□□□□ -1.62
CHD9-212ENST00000564641 POM121BA6NF01 834 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 PRSS44E7EML9 344 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 PQBP1O60828 265 aaKnown RBP4.9□□□□□ -1.63
CHD9-212ENST00000564641 ZXDBP98169 803 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 SMTNL2Q2TAL5 461 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 LRIG3Q6UXM1 1119 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 C14orf80Q86SX3 495 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 DGKHQ86XP1 1220 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 RHPN2Q8IUC4 686 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 LPAR1Q92633 364 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 CTAGE1Q96RT6 745 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 RBM38Q9H0Z9 239 aaKnown RBP4.9□□□□□ -1.63
CHD9-212ENST00000564641 UBE2J1Q9Y385 318 aaPredicted RBP4.9□□□□□ -1.63
CHD9-212ENST00000564641 TTC3P53804 2025 aa4.9□□□□□ -1.63
CHD9-212ENST00000564641 A0A1W2PPC4 97 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 EGR1P18146 543 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 PIK3CBP42338 1070 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 P2RX3P56373 397 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 PPATQ06203 517 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 NSUN2Q08J23 767 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHD9-212ENST00000564641 P3H1Q32P28 736 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 ZNF474Q6S9Z5 364 aaPredicted RBP4.89□□□□□ -1.63
CHD9-212ENST00000564641 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 PIK3AP1Q6ZUJ8 805 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 KRT27Q7Z3Y8 459 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 SRFBP1Q8NEF9 429 aaKnown RBP4.89□□□□□ -1.63
CHD9-212ENST00000564641 TSR2Q969E8 191 aaKnown RBP4.89□□□□□ -1.63
CHD9-212ENST00000564641 PCDHAC1Q9H158 963 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 AS3MTQ9HBK9 375 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 FBXO28Q9NVF7 368 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 ZMYND8Q9ULU4 1186 aaPredicted RBP4.89□□□□□ -1.63
CHD9-212ENST00000564641 CA14Q9ULX7 337 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 PCDHB7Q9Y5E2 793 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 CEP170Q5SW79 1584 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 SHROOM2Q13796 1616 aa4.89□□□□□ -1.63
CHD9-212ENST00000564641 TSHRP16473 764 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 CASP5P51878 434 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 PGM5Q15124 567 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 MAPKAPK3Q16644 382 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 C6orf10Q5SRN2 563 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 DDIASQ8IXT1 998 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 ADPRHL1Q8NDY3 354 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 SF3B5Q9BWJ5 86 aaKnown RBP4.88□□□□□ -1.63
CHD9-212ENST00000564641 ARHGAP39Q9C0H5 1083 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 PRDM16Q9HAZ2 1276 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 SLC8A2Q9UPR5 921 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 CUL7Q14999 1698 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 KIF27Q86VH2 1401 aa4.88□□□□□ -1.63
CHD9-212ENST00000564641 PRG4Q92954 1404 aaPredicted RBP4.88□□□□□ -1.63
CHD9-212ENST00000564641 A0A1W2PPC1 479 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 C4orf47A7E2U8 309 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 GTPBP1O00178 669 aaKnown RBP4.87□□□□□ -1.63
CHD9-212ENST00000564641 APOL1O14791 398 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 SLC28A2O43868 658 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 NGFRP08138 427 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 HOXB2P14652 356 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 GABRB3P28472 473 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 STT3AP46977 705 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 IFIT5Q13325 482 aaKnown RBP4.87□□□□□ -1.63
CHD9-212ENST00000564641 CSHL1Q14406 222 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 KLHDC7AQ5VTJ3 777 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 RAP1GAP2Q684P5 730 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 DLK2Q6UY11 383 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 FBXL14Q8N1E6 418 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 IQCF1Q8N6M8 205 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 OR52N4Q8NGI2 321 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 ZNF479Q96JC4 524 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 FAR2Q96K12 515 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 SLCO5A1Q9H2Y9 848 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 STARD7Q9NQZ5 370 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 HIF1ANQ9NWT6 349 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 UTS2RQ9UKP6 389 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 LAMP3Q9UQV4 416 aa4.87□□□□□ -1.63
CHD9-212ENST00000564641 GXYLT2A0PJZ3 443 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 GAGE12JA6NER3 117 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 NPC1O15118 1278 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 KPNA5O15131 536 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 IFNA2P01563 188 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 CENPBP07199 599 aaPredicted RBP4.86□□□□□ -1.63
CHD9-212ENST00000564641 RFPL3SP0C7P2 107 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 ALADP13716 330 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 TGM2P21980 687 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 CIITAP33076 1130 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
CHD9-212ENST00000564641 ZNF585BQ52M93 769 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 TTC39AQ5SRH9 613 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 TTLL5Q6EMB2 1281 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.86□□□□□ -1.63
CHD9-212ENST00000564641 TMEM174Q8WUU8 243 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms