RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 PENKP01210 267 aaPredicted RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 TNNT1P13805 278 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 CHKAP35790 457 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 SOX9P48436 509 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 MARCKSL1P49006 195 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 RPS24P62847 133 aaKnown RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 NRG1Q02297 640 aaPredicted RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 SEMA3BQ13214 749 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 HADHQ16836 314 aaKnown RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 FYB2Q5VWT5 728 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 CIR1Q86X95 450 aaPredicted RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 CFAP52Q8N1V2 620 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 CPA6Q8N4T0 437 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 TEKT4Q8WW24 435 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 HSPH1Q92598 858 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 CD101Q93033 1021 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 BHMTQ93088 406 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 C1orf74Q96LT6 269 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 UHRF1Q96T88 793 aaPredicted RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 DDX50Q9BQ39 737 aaKnown RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 DHX35Q9H5Z1 703 aaKnown RBP16.04■□□□□ 0.16
CDH11-209ENST00000564317 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDH11-209ENST00000564317 MARK1Q9P0L2 795 aa16.04■□□□□ 0.16
CDH11-209ENST00000564317 E9PAM4 449 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 HOXC11O43248 304 aaPredicted RBP16.03■□□□□ 0.16
CDH11-209ENST00000564317 ADH1CP00326 375 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 ADH5P11766 374 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 HOXD9P28356 352 aaPredicted RBP16.03■□□□□ 0.16
CDH11-209ENST00000564317 ARSEP51690 589 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 ITPRIPL2Q3MIP1 535 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 C5orf22Q49AR2 442 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 BOLA3Q53S33 107 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
CDH11-209ENST00000564317 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 C12orf40Q86WS4 652 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 PSTKQ8IV42 348 aaKnown RBP16.03■□□□□ 0.16
CDH11-209ENST00000564317 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 KRT35Q92764 455 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 DNASE1L2Q92874 299 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 RPRD1AQ96P16 312 aaPredicted RBP16.03■□□□□ 0.16
CDH11-209ENST00000564317 BBS2Q9BXC9 721 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 TRPV5Q9NQA5 729 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.03■□□□□ 0.16
CDH11-209ENST00000564317 OR12D3Q9UGF7 316 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 CLEC4EQ9ULY5 219 aa16.03■□□□□ 0.16
CDH11-209ENST00000564317 TICRRQ7Z2Z1 1910 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 IGLV3-10A0A075B6K4 115 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 DRGXA6NNA5 263 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 TBL1XO60907 577 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 CNTN5O94779 1100 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 LRIG2O94898 1065 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 KRT7P08729 469 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 CD48P09326 243 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 L1CAMP32004 1257 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 GJA4P35212 333 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 DPYSL2Q16555 572 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 ANO4Q32M45 955 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 MPPE1Q53F39 396 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 ALFQ53S48 1182 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 HS1BP3Q53T59 392 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 LRRC38Q5VT99 294 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 RNF43Q68DV7 783 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 POLNQ7Z5Q5 900 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 RHOT1Q8IXI2 618 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 HJURPQ8NCD3 748 aaPredicted RBP16.02■□□□□ 0.16
CDH11-209ENST00000564317 CSGALNACT1Q8TDX6 532 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 DDI1Q8WTU0 396 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 TMA16Q96EY4 203 aaKnown RBP16.02■□□□□ 0.16
CDH11-209ENST00000564317 PCDH18Q9HCL0 1135 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 HEBP1Q9NRV9 189 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 KCND1Q9NSA2 647 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 MPP6Q9NZW5 540 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 STIM2Q9P246 746 aa16.02■□□□□ 0.16
CDH11-209ENST00000564317 PACSIN2Q9UNF0 486 aaPredicted RBP16.02■□□□□ 0.16
CDH11-209ENST00000564317 MYO10Q9HD67 2058 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 SHISA7A6NL88 538 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 PSTPIP1O43586 416 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 CREB3O43889 395 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 KRT1P04264 644 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 TYRP14679 529 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 CTNNA2P26232 953 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 HOXC13P31276 330 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 CTNNA1P35221 906 aaKnown RBP16.01■□□□□ 0.15
CDH11-209ENST00000564317 OPRD1P41143 372 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 PFKPQ01813 784 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 GAD2Q05329 585 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 PPP6R3Q5H9R7 873 aaPredicted RBP16.01■□□□□ 0.15
CDH11-209ENST00000564317 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
CDH11-209ENST00000564317 PEX26Q7Z412 305 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 SYCE1Q8N0S2 351 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 FAM71BQ8TC56 605 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 WFDC5Q8TCV5 224 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 RAPGEF5Q92565 580 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 TSC1Q92574 1164 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 TBC1D31Q96DN5 1066 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 ZNF212Q9UDV6 495 aa16.01■□□□□ 0.15
CDH11-209ENST00000564317 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms