RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	NECTIN3	Q9NQS3	549 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP27B1	O15528	508 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ERP29	P30040	261 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PSME3	P61289	254 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	WDR72	Q3MJ13	1102 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	AGAP9	Q5VTM2	703 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ELMSAN1	Q6PJG2	1045 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	LRRC57	Q8N9N7	239 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	HERC2P3	Q9BVR0	1158 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	BBS2	Q9BXC9	721 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNHIT2	Q9UHR6	403 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ADAM28	Q9UKQ2	775 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DDX3Y	O15523	660 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PTGIR	P43119	386 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ATXN3	P54252	364 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PLET1	Q6UQ28	207 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	RNF19B	Q6ZMZ0	732 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC22A9	Q8IVM8	553 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SPATA18	Q8TC71	538 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ARPC5L	Q9BPX5	153 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	COG4	Q9H9E3	785 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MYCLP1	P12525	358 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	AKAP5	P24588	427 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FAP	Q12884	760 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TFDP3	Q5H9I0	405 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ARHGEF16	Q5VV41	709 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KBTBD6	Q86V97	674 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TMA16	Q96EY4	203 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TBC1D14	Q9P2M4	693 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM186A	A6NE01	2351 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TPR	P12270	2363 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	RNF225	M0QZC1	329 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KRT19	P08727	400 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GABPA	Q06546	454 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	C6orf52	Q5T4I8	152 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CAPN12	Q6ZSI9	719 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM92B	Q6ZTR7	304 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF720	Q7Z2F6	126 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GBA3	Q9H227	469 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TEX28	O15482	410 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC4A1	P02730	911 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ATP2B4	P23634	1241 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DENND1A	Q8TEH3	1009 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CACYBP	Q9HB71	228 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288		K7ERI5	159 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NCAM2	O15394	837 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CRYZL1	O95825	349 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NR3C2	P08235	984 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ATF6	P18850	670 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TALDO1	P37837	337 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	EFNA5	P52803	228 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	WDR36	Q8NI36	951 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KLHL32	Q96NJ5	620 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	IL1B	P01584	269 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TBCEL	Q5QJ74	424 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CCDC28A	Q8IWP9	274 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJC16	Q9Y2G8	782 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	T-ENOL	P0DO92	83 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	EIF2D	P41214	584 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ALDH9A1	P49189	494 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MYBPC1	Q00872	1141 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SBK1	Q52WX2	424 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	LACC1	Q8IV20	430 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SEC31B	Q9NQW1	1179 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.35	□□□□□ -1.71	8e-7	■■□□□ 14
MACF1-231	ENST00000564288	INO80B-WBP1	J3KQ70	363 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	DHFR	P00374	187 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	PLEK	P08567	350 aa	Predicted RBP	4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	TP53BP2	Q13625	1128 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	USP10	Q14694	798 aa	Known RBP	4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	TRPV3	Q8NET8	790 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	JDP2	Q8WYK2	163 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	IRS2	Q9Y4H2	1338 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	C3orf70	A6NLC5	250 aa	Predicted RBP	4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	ALX3	O95076	343 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	CCDC157	Q569K6	752 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	KBTBD8	Q8NFY9	601 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	ARHGEF26	Q96DR7	871 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	ERI2	A8K979	691 aa	Known RBP	4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	CLIC2	O15247	247 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	WDPCP	O95876	746 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	BMP2	P12643	396 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	ENTPD1	P49961	510 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM76B	Q5HYJ3	339 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	NWD1	Q149M9	1564 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	UPP2	O95045	317 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	TGM6	O95932	706 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	THRB	P10828	461 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	PTK6	Q13882	451 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	PHKG1	Q16816	387 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	EIF3M	Q7L2H7	374 aa	Known RBP	4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	SMG8	Q8ND04	991 aa	Known RBP	4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	COMMD10	Q9Y6G5	202 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF197	O14709	1029 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	ABL1	P00519	1130 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	CD19	P15391	556 aa		4.34	□□□□□ -1.71
MACF1-231	ENST00000564288	CASP1	P29466	404 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms