RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PNPLA8Q9NP80 782 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 KCNK1O00180 336 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 COX4I1P13073 169 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 DPEP1P16444 411 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 PTPRAP18433 802 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 GLRBP48167 497 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 COG7P83436 770 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 GHRHRQ02643 423 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 ART3Q13508 389 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 CCNIQ14094 377 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 HSDL1Q3SXM5 330 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 PPP1R26Q5T8A7 1209 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 CCNYL1Q8N7R7 359 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 CEP70Q8NHQ1 597 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 RAB3IL1Q8TBN0 382 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 TFB1MQ8WVM0 346 aaKnown RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 COPS5Q92905 334 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 OPTNQ96CV9 577 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 LRRC39Q96DD0 335 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 OXCT2Q9BYC2 517 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 GCOM2Q9BZD3 368 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-203ENST00000563623 DCDC2Q9UHG0 476 aa12.14□□□□□ -0.47
ABCA3-203ENST00000563623 MYOCOSA0A1B0GUC4 107 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 HMX2A2RU54 273 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 FAM159BA6NKW6 160 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 ALDH1A3P47895 512 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 FLOT2Q14254 428 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 MBLAC2Q68D91 279 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 GADL1Q6ZQY3 521 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 PDSS2Q86YH6 399 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 CLEC4CQ8WTT0 213 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 SNRNP27Q8WVK2 155 aaKnown RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 FAM167AQ96KS9 214 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 ZNF778Q96MU6 729 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 CDRT15Q96T59 188 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 Q9H521 79 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 COPS7BQ9H9Q2 264 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 SSX2IPQ9Y2D8 614 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 NRXN2Q9P2S2 1712 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 A0A087WZ62 844 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 B4GALT4O60513 344 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 IL18RAPO95256 599 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 GOT1P17174 413 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 AOC1P19801 751 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 RXRBP28702 533 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 MCCD1P59942 119 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 STILQ15468 1287 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 GLRA4Q5JXX5 417 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 HTR3CQ8WXA8 447 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 FDXACB1Q9BRP7 624 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 C15orf38-AP3S2A0A0A6YYH1 394 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 SNNO75324 88 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 CLPTM1O96005 669 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 VTNP04004 478 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 ALDOAP04075 364 aaKnown RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 VAV1P15498 845 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 PSMB4P28070 264 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 CHN2P52757 468 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 SLC10A2Q12908 348 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-203ENST00000563623 NME3Q13232 169 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 DLG2Q15700 870 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 TAZQ16635 292 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 ARPINQ7Z6K5 226 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 STRA8Q7Z7C7 330 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 ZNF781Q8N8C0 355 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 NAT14Q8WUY8 206 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 SYBUQ9NX95 663 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 DPP3Q9NY33 737 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 PPME1Q9Y570 386 aa12.13□□□□□ -0.47
ABCA3-203ENST00000563623 RNF103O00237 685 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 ITGAXP20702 1163 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 IL4RP24394 825 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 PGGT1BP53609 377 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 NDRG1Q92597 394 aaKnown RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 GALNT8Q9NY28 637 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 ADA2Q9NZK5 511 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 HNRNPCP07910 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 GRK2P25098 689 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 EPHA3P29320 983 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms