RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ERVK-5Q9HDB9 667 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 WWOXQ9NZC7 414 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 UBE2J1Q9Y385 318 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 PNMA6EA0A0J9YXQ4 647 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 PODXLO00592 558 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 CNTN5O94779 1100 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 T-ENOLP0DO92 83 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 CIITAP33076 1130 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 SLC37A1P57057 533 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 GAD2Q05329 585 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 CSHL1Q14406 222 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 FAM209BQ5JX69 171 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 KIAA1755Q5JYT7 1200 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 TRAPPC11Q7Z392 1133 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 OR52N4Q8NGI2 321 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 MCRS1Q96EZ8 462 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 ZNF479Q96JC4 524 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 ZNF347Q96SE7 839 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 WDR83Q9BRX9 315 aaKnown RBP3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 KCNK9Q9NPC2 374 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 FZD3Q9NPG1 666 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 SLC8A2Q9UPR5 921 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 LAMP3Q9UQV4 416 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 DTNAQ9Y4J8 743 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 PCDHB7Q9Y5E2 793 aa3.78□□□□□ -1.8
HMGB1P33-201ENST00000563485 EVPLQ92817 2033 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 DPPA5A6NC42 116 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 LACTBL1A8MY62 500 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 PRR23D1E9PI22 279 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 H0YGN5 161 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 M0QYT0 321 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 RHODO00212 210 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 PCDH17O14917 1159 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 FGF18O76093 207 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 PARNO95453 639 aaKnown RBP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 PRR23D2P0DMB1 279 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 TRIM27P14373 513 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 TBXAS1P24557 533 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 EEF1GP26641 437 aaKnown RBP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 CDC25AP30304 524 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 ARRB2P32121 409 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 ZNF585BQ52M93 769 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 ISM2Q6H9L7 571 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 LRIG3Q6UXM1 1119 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 CCAR1Q8IX12 1150 aaKnown RBP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 FAM47BQ8NA70 645 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 TMEM174Q8WUU8 243 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 BRI3BPQ8WY22 251 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 ZNF566Q969W8 418 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 RIPOR3Q96MK2 946 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 PAAF1Q9BRP4 392 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 ZPBPQ9BS86 351 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 EPS8L2Q9H6S3 715 aa3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P33-201ENST00000563485 TRIP12Q14669 1992 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 RASA4BC9J798 803 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 TNFRSF13BO14836 293 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 RASA4O43374 803 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 PEPDP12955 493 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 PLA2G2AP14555 144 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 TGM2P21980 687 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 HOXA11P31270 313 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 PGGT1BP53609 377 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 SHC2P98077 582 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 GRM4Q14833 912 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 LONRF1Q17RB8 773 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 HMBOX1Q6NT76 420 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 WDR93Q6P2C0 686 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 SLC39A5Q6ZMH5 540 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 DPP9Q86TI2 863 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 TTC30AQ86WT1 665 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 PAQR4Q8N4S7 273 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 RBMXL3Q8N7X1 1067 aaKnown RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 SRFBP1Q8NEF9 429 aaKnown RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 LPAR1Q92633 364 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 KAT2AQ92830 837 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 FAR2Q96K12 515 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 C8orf48Q96LL4 319 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 RBM38Q9H0Z9 239 aaKnown RBP3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 MYLK2Q9H1R3 596 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 SPAG4Q9NPE6 437 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 HELLSQ9NRZ9 838 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 CHPF2Q9P2E5 772 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 CA14Q9ULX7 337 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 PROCRQ9UNN8 238 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 NOTCH4Q99466 2003 aa3.76□□□□□ -1.81
HMGB1P33-201ENST00000563485 LOC105369274A0A096LPK9 316 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 LOC102723532A0A0G2JNH3 316 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 SPTLC2O15270 562 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 NFATC1O95644 943 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 CER1O95813 267 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 NGFRP08138 427 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 TM4SF4P48230 202 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 ZXDBP98169 803 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 RAB30Q15771 203 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 AAK1Q2M2I8 961 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 MPEG1Q2M385 716 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 ANKRD40Q6AI12 368 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 ADGRF3Q8IZF5 1079 aa3.75□□□□□ -1.81
HMGB1P33-201ENST00000563485 OR4N4Q8N0Y3 316 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms