RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ELF2Q15723 593 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 RAP1GAP2Q684P5 730 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 POTEHQ6S545 545 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 TMEM184AQ6ZMB5 413 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 LEMD2Q8NC56 503 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SLC35B2Q8TB61 432 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SMG7Q92540 1137 aaKnown RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 PPP2R3CQ969Q6 453 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 TTYH1Q9H313 450 aaPredicted RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 PRDM12Q9H4Q4 367 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SFXN1Q9H9B4 322 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 HOMER3Q9NSC5 361 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SMPD4Q9NXE4 827 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 PCYOX1Q9UHG3 505 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 CPQQ9Y646 472 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 TRAV19A0A0A6YYK7 116 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 E9PAM4 449 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 TTI1O43156 1089 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 DAPK3O43293 454 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 ACSL4O60488 711 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 ZFXP17010 805 aaPredicted RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 PFKLP17858 780 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 DDX6P26196 483 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMG1-208ENST00000563448 CORO1AP31146 461 aaKnown RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 HOXC13P31276 330 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 SLC7A9P82251 487 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 SLC7A5Q01650 507 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 GBE1Q04446 702 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 PAFAH1B3Q15102 231 aaKnown RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 NOMO1Q15155 1222 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 OASLQ15646 514 aaKnown RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 GLE1Q53GS7 698 aaKnown RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 GPR158Q5T848 1215 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 DRICH1Q6PGQ1 229 aaPredicted RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 TMC5Q6UXY8 1006 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 DENND1CQ8IV53 801 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 EFHBQ8N7U6 833 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 P3H4Q92791 437 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 AZIN2Q96A70 460 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 PRDM16Q9HAZ2 1276 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 PIDD1Q9HB75 910 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 DZANK1Q9NVP4 752 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 DMGDHQ9UI17 866 aaKnown RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 KIF26AQ9ULI4 1882 aaPredicted RBP10.49□□□□□ -0.73
SMG1-208ENST00000563448 VANGL2Q9ULK5 521 aa10.49□□□□□ -0.73
SMG1-208ENST00000563448 CDH23Q9H251 3354 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 MFSD11O43934 449 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 GREM1O60565 184 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 MAP3K6O95382 1288 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 TACR2P21452 398 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 EPHB2P29323 1055 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 SLC6A4P31645 630 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 HTR7P34969 479 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 HARS2P49590 506 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 IRAK1P51617 712 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 VCPP55072 806 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 MTA1Q13330 715 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 BYSLQ13895 437 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 DHX34Q14147 1143 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 FAM133BQ5BKY9 247 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 RARS2Q5T160 578 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 FBXL22Q6P050 247 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 CCDC105Q8IYK2 499 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 NETO2Q8NC67 525 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 IGSF8Q969P0 613 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 MYEOVQ96EZ4 313 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 HINFPQ9BQA5 517 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 FRMD8P1Q9BZ68 369 aaPredicted RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 LMCD1Q9NZU5 365 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 STIM2Q9P246 746 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 AGO1Q9UL18 857 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 DRG1Q9Y295 367 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 HEY1Q9Y5J3 304 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 MIA3Q5JRA6 1907 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 IGLV3-10A0A075B6K4 115 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 DRGXA6NNA5 263 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 CKMP06732 381 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 CEBPBP17676 345 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 EIF3EP60228 445 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 DR1Q01658 176 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 ADAM15Q13444 863 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 GRIN2CQ14957 1233 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 C5orf22Q49AR2 442 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 ARHGAP15Q53QZ3 475 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 RWDD4Q6NW29 188 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 ANKRD54Q6NXT1 300 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 B4GALNT4Q76KP1 1039 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 ZC3H18Q86VM9 953 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 CHSY1Q86X52 802 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 CMTM8Q8IZV2 173 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 GPR161Q8N6U8 529 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 NPWQ8N729 165 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 ATL2Q8NHH9 583 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 ITFG1Q8TB96 612 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms