RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NPAS1Q99742 590 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 HERC2P3Q9BVR0 1158 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 RIC8AQ9NPQ8 531 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 GGA3Q9NZ52 723 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 ZNHIT2Q9UHR6 403 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 GJD2Q9UKL4 321 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 C3orf70A6NLC5 250 aaPredicted RBP6.29□□□□□ -1.4
LINC00557-201ENST00000563184 PROP1O75360 226 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 ALDOAP04075 364 aaKnown RBP6.29□□□□□ -1.4
LINC00557-201ENST00000563184 IDUAP35475 653 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 MCM2P49736 904 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 VPS41P49754 854 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 RBM5P52756 815 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC00557-201ENST00000563184 SLC37A1P57057 533 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 DMWDQ09019 674 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 SEC23BQ15437 767 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 ZNF484Q5JVG2 852 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 PRAMEF17Q5VTA0 474 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 FCRLBQ6BAA4 426 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 FBXO42Q6P3S6 717 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 SLC39A5Q6ZMH5 540 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 TFAP2DQ7Z6R9 452 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 GPR78Q96P69 363 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 TWNKQ96RR1 684 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 RMI1Q9H9A7 625 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 PLEKHA2Q9HB19 425 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 ASNSD1Q9NWL6 643 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 DERAQ9Y315 318 aa6.29□□□□□ -1.4
LINC00557-201ENST00000563184 COPG1Q9Y678 874 aaKnown RBP6.29□□□□□ -1.4
LINC00557-201ENST00000563184 SIRT4Q9Y6E7 314 aaPredicted RBP6.29□□□□□ -1.4
LINC00557-201ENST00000563184 RRN3P2A6NIE6 340 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 TTC34A8MYJ7 566 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 STX16-NPEPL1H3BU86 382 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 STX16O14662 325 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 RRHO14718 337 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 PYGLP06737 847 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 POLBP06746 335 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 CHRM5P08912 532 aaPredicted RBP6.28□□□□□ -1.4
LINC00557-201ENST00000563184 CSF1P09603 554 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 KPNB1Q14974 876 aaKnown RBP6.28□□□□□ -1.4
LINC00557-201ENST00000563184 TAF12Q16514 161 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 RANBP10Q6VN20 620 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 ADGRF3Q8IZF5 1079 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 PTGR2Q8N8N7 351 aaPredicted RBP6.28□□□□□ -1.4
LINC00557-201ENST00000563184 EXD3Q8N9H8 876 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 PNLDC1Q8NA58 520 aaKnown RBP6.28□□□□□ -1.4
LINC00557-201ENST00000563184 TMLHEQ9NVH6 421 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 BAG5Q9UL15 447 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 DNAJC16Q9Y2G8 782 aa6.28□□□□□ -1.4
LINC00557-201ENST00000563184 HEMK1Q9Y5R4 338 aaPredicted RBP6.28□□□□□ -1.4
LINC00557-201ENST00000563184 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.27□□□□□ -1.41
LINC00557-201ENST00000563184 UBE2Q2LH0YL09 131 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 GRM8O00222 908 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 SLC3A2P08195 630 aaKnown RBP6.27□□□□□ -1.41
LINC00557-201ENST00000563184 CNPP09543 421 aaKnown RBP6.27□□□□□ -1.41
LINC00557-201ENST00000563184 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 CYP2A6P11509 494 aaPredicted RBP6.27□□□□□ -1.41
LINC00557-201ENST00000563184 CHN1P15882 459 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 CNTFP26441 200 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 CCR5P51681 352 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 SHC2P98077 582 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 TMEM119Q4V9L6 283 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 STRIP1Q5VSL9 837 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 RFX6Q8HWS3 928 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF398Q8TD17 642 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 CELF1Q92879 486 aaKnown RBP6.27□□□□□ -1.41
LINC00557-201ENST00000563184 USP13Q92995 863 aaPredicted RBP6.27□□□□□ -1.41
LINC00557-201ENST00000563184 ARRDC3Q96B67 414 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 P2RY11Q96G91 374 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 PIGSQ96S52 555 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 NUAK2Q9H093 628 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 PDE11AQ9HCR9 933 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 MLXIPLQ9NP71 852 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 PDP2Q9P2J9 529 aa6.27□□□□□ -1.41
LINC00557-201ENST00000563184 PRRT4C9JH25 899 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
LINC00557-201ENST00000563184 NUDT3O95989 172 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 ACP5P13686 325 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 BMP5P22003 454 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 TUBA4AP68366 448 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 ALFQ53S48 1182 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF788Q6ZQV5 615 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 FSIP1Q8NA03 581 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 SRFBP1Q8NEF9 429 aaKnown RBP6.26□□□□□ -1.41
LINC00557-201ENST00000563184 LINS1Q8NG48 757 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 ASB2Q96Q27 587 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 SENP7Q9BQF6 1050 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 HTATIP2Q9BUP3 242 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 RIOX1Q9H6W3 641 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 PRDM16Q9HAZ2 1276 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 SLC22A11Q9NSA0 550 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 MTMR4Q9NYA4 1195 aa6.26□□□□□ -1.41
LINC00557-201ENST00000563184 RRP7AQ9Y3A4 280 aaKnown RBP6.26□□□□□ -1.41
LINC00557-201ENST00000563184 TMEM232C9JQI7 657 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 EYA2O00167 538 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 CNTN5O94779 1100 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 AGR2O95994 175 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms