RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 CER1O95813 267 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FYNP06241 537 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ZNF883P0CG24 379 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MATKP42679 507 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SLC11A2P49281 568 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CSNK1EP49674 416 aaKnown RBP17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 RPS14P62263 151 aaKnown RBP17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 RING1Q06587 406 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 GLRX5Q86SX6 157 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 UNC45BQ8IWX7 931 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 BAHD1Q8TBE0 780 aaPredicted RBP17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SNX19Q92543 992 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MYEOVQ96EZ4 313 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MYO19Q96H55 970 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 DHTKD1Q96HY7 919 aaPredicted RBP17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 LMLNQ96KR4 655 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CEP63Q96MT8 703 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TIGD1Q96MW7 591 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MTG2Q9H4K7 406 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 GOLGA6L4A6NEF3 574 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TAF4O00268 1085 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 IRAK2O43187 625 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ATP5BP06576 529 aaKnown RBP17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 AFF3P51826 1226 aaKnown RBP17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TBX4P57082 545 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CCDC40Q4G0X9 1142 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TTI2Q6NXR4 508 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 IL27RAQ6UWB1 636 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 DBX2Q6ZNG2 339 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 RRAGAQ7L523 313 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SLCO6A1Q86UG4 719 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ARHGEF19Q8IW93 802 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SETD7Q8WTS6 366 aaKnown RBP17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 AZIN2Q96A70 460 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 BIRC7Q96CA5 298 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FCRL2Q96LA5 508 aaPredicted RBP17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 HSFY1Q96LI6 401 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 GTPBP4Q9BZE4 634 aaKnown RBP17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 IRX2Q9BZI1 471 aaPredicted RBP17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MIS12Q9H081 205 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MAN1B1Q9UKM7 699 aa17.35■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SEMA4FO95754 770 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 DNTTP04053 509 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 POLR2EP19388 210 aaKnown RBP17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 BMP6P22004 513 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ZBTB16Q05516 673 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 STIM1Q13586 685 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 STILQ15468 1287 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 KIF19Q2TAC6 998 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 LAYNQ6UX15 382 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MFN1Q8IWA4 741 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FIBINQ8TAL6 211 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 DQX1Q8TE96 717 aaKnown RBP17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TMEM131Q92545 1883 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 BTBD1Q9H0C5 482 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FBRSQ9HAH7 460 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TM9SF3Q9HD45 589 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TOR4AQ9NXH8 423 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 STIM2Q9P246 746 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 INTS6Q9UL03 887 aaKnown RBP17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SNX11Q9Y5W9 270 aa17.34■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 NUMA1Q14980 2115 aa17.33■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FBXO21O94952 628 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 RPL34P49207 117 aaKnown RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 RPS24P62847 133 aaKnown RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GCNT1Q02742 428 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KLHL10Q6JEL2 608 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PROSER1Q86XN7 944 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SCUBE3Q8IX30 993 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ADAM32Q8TC27 787 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GOLGA1Q92805 767 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TTC17Q96AE7 1141 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SLC39A13Q96H72 371 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MRGPRX3Q96LB0 322 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KREMEN1Q96MU8 473 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ORAI3Q9BRQ5 295 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NUCKS1Q9H1E3 243 aaKnown RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 RSPH9Q9H1X1 276 aaPredicted RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 OSGEPQ9NPF4 335 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 HOOK1Q9UJC3 728 aaKnown RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NAALADL1Q9UQQ1 740 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 APOBEC2Q9Y235 224 aaKnown RBP17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 BTBD3Q9Y2F9 522 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PCDHGB2Q9Y5G2 931 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PLXNB3Q9ULL4 1909 aa17.33■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 P4HA2O15460 535 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FLRT2O43155 660 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FSBPO95073 299 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 IGHV4-34P06331 123 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CSKP41240 450 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GPD2P43304 727 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GRIA4P48058 902 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SCAPQ12770 1279 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TTC31Q49AM3 519 aaPredicted RBP17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 KCNT1Q5JUK3 1230 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms