RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ATP5HO75947 161 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 DDAH1O94760 285 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 GGPS1O95749 300 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 WNT11O96014 354 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 APOEP02649 317 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CYP1A1P04798 512 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PRR35P0CG20 571 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 GAAP10253 952 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 NR2F1P10589 423 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PRG2P13727 222 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 HNRNPLP14866 589 aaKnown RBP eCLIP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PRKACAP17612 351 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 SPINK2P20155 84 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CCNA2P20248 432 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 POU3F2P20265 443 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 TNFSF4P23510 183 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CHMP24386 653 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 NFKBIAP25963 317 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ALDH4A1P30038 563 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 RGS2P41220 211 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF165P49910 485 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 EIF3EP60228 445 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 S100A12P80511 92 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CCZ1BP86790 482 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CCZ1P86791 482 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 MAP4K2Q12851 820 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 DNAJC3Q13217 504 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CHIT1Q13231 466 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF267Q14586 743 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ARHGAP19Q14CB8 494 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 NONOQ15233 471 aaKnown RBP eCLIP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 FLYWCH1Q4VC44 716 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 FOXB2Q5VYV0 432 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CES4AQ5XG92 561 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 MRM1Q6IN84 353 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 METTL2BQ6P1Q9 378 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CYB5D1Q6P9G0 228 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PI16Q6UXB8 463 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ISLR2Q6UXK2 745 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 MARK2Q7KZI7 788 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ADCK1Q86TW2 530 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 RFX6Q8HWS3 928 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 APLFQ8IW19 511 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 LRRC8AQ8IWT6 810 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 THNSL1Q8IYQ7 743 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ST13P4Q8IZP2 240 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 HDDC3Q8N4P3 179 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 TTLL6Q8N841 843 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ZBTB34Q8NCN2 500 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 HIPK4Q8NE63 616 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CLHC1Q8NHS4 586 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF671Q8TAW3 534 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 SNX29Q8TEQ0 813 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 GANCQ8TET4 914 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 FBLIM1Q8WUP2 373 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 IP6K1Q92551 441 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 GATA6Q92908 595 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 USP7Q93009 1102 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 VWCEQ96DN2 955 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 SPACA9Q96E40 222 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 TMA16Q96EY4 203 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 EDC3Q96F86 508 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 MED30Q96HR3 178 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 TMEM68Q96MH6 324 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF560Q96MR9 790 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PKP4Q99569 1192 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 NOC4LQ9BVI4 516 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 MTFR1LQ9H019 292 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 HSD3B7Q9H2F3 369 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 FAM204AQ9H8W3 233 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 COPS7BQ9H9Q2 264 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 SLC35D1Q9NTN3 355 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ECHDC1Q9NTX5 307 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 WWOXQ9NZC7 414 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ASIC3Q9UHC3 531 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 TMCO1Q9UM00 188 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CHMP2BQ9UQN3 213 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 DLGAP4Q9Y2H0 992 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 SH3GLB1Q9Y371 365 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 NAALAD2Q9Y3Q0 740 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PMF1-BGLAPU3KQ54 211 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 OVOS2A0A0G2JMS6 1433 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 PLEKHG1Q9ULL1 1385 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 ANKARQ7Z5J8 1434 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 A0A087WUV0 522 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-211ENST00000562199 F8W8V4 182 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 H0YAE9 185 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 GIPC1O14908 333 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 KMOO15229 486 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 DNAJC8O75937 253 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-211ENST00000562199 TUBB4AP04350 444 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 PFKMP08237 780 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 CALM1P0DP23 149 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 CALM2P0DP24 149 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 CALM3P0DP25 149 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 PYGMP11217 842 aa5.69□□□□□ -1.5
CAPN3-211ENST00000562199 ESRRAP11474 423 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-211ENST00000562199 SELLP14151 372 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms