RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 HMBSP08397 361 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 POU2F2P09086 479 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 EPCAMP16422 314 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 ERCC2P18074 760 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 MX2P20592 715 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 DDX6P26196 483 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP3-219ENST00000561326 TNFRSF8P28908 595 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 PAFAH1B3Q15102 231 aaKnown RBP10.63□□□□□ -0.71
USP3-219ENST00000561326 DUSP6Q16828 381 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 FAM72AQ5TYM5 149 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 FAM72DQ6L9T8 149 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 C4orf22Q6V702 233 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 CCNI2Q6ZMN8 369 aaPredicted RBP10.63□□□□□ -0.71
USP3-219ENST00000561326 ZC3H18Q86VM9 953 aaKnown RBP10.63□□□□□ -0.71
USP3-219ENST00000561326 FAM72BQ86X60 149 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 BBOF1Q8ND07 529 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 IFT81Q8WYA0 676 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 LRRC45Q96CN5 670 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 MRPL38Q96DV4 380 aaKnown RBP10.63□□□□□ -0.71
USP3-219ENST00000561326 KLF16Q9BXK1 252 aaPredicted RBP10.63□□□□□ -0.71
USP3-219ENST00000561326 LRRC3Q9BY71 257 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 FAM129AQ9BZQ8 928 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 BRD8Q9H0E9 1235 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 RNF38Q9H0F5 515 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 EPC1Q9H2F5 836 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 PIDD1Q9HB75 910 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 ANLNQ9NQW6 1124 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 GDF3Q9NR23 364 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 PPARGC1AQ9UBK2 798 aaKnown RBP10.63□□□□□ -0.71
USP3-219ENST00000561326 HS3ST4Q9Y661 456 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 CCDC195A0A1B0GUA6 201 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 C2orf78A6NCI8 922 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 E9PAM4 449 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 I6L893 689 aaPredicted RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 PPP1R12AO14974 1030 aaPredicted RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 DCLK1O15075 740 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 ACSL4O60488 711 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 STK10O94804 968 aaKnown RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 LATS1O95835 1130 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 KRT14P02533 472 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 CKMP06732 381 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 PECAM1P16284 738 aaPredicted RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 ITIH2P19823 946 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 ADCY8P40145 1251 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 NRIP1P48552 1158 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 KCNQ1P51787 676 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 EPHA5P54756 1037 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 MRPS25P82663 173 aaKnown RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 CAV1Q03135 178 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 CALCOCO2Q13137 446 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 AUHQ13825 339 aaKnown RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 PTK6Q13882 451 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 HLTFQ14527 1009 aaKnown RBP eCLIP10.62□□□□□ -0.71
USP3-219ENST00000561326 OASLQ15646 514 aaKnown RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 MS4A13Q5J8X5 152 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 RABGAP1LQ5R372 815 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 NCBP2-AS2Q69YL0 99 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 TXNDC8Q6A555 127 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 NPNTQ6UXI9 565 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 GAREM2Q75VX8 874 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 TMEM150AQ86TG1 271 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 DDX42Q86XP3 938 aaKnown RBP eCLIP10.62□□□□□ -0.71
USP3-219ENST00000561326 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 LRRC49Q8IUZ0 686 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 ALLCQ8N6M5 410 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 ARL14EPQ8N8R7 260 aaPredicted RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 MAB21L3Q8N8X9 362 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 GDPD5Q8WTR4 605 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 HNRNPLLQ8WVV9 542 aaKnown RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 PNKPQ96T60 521 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 FAM118BQ9BPY3 351 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 TMEM121Q9BTD3 319 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 ARFGAP3Q9NP61 516 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 GKN1Q9NS71 199 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 DZANK1Q9NVP4 752 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 ASIC3Q9UHC3 531 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 LSM7Q9UK45 103 aaKnown RBP10.62□□□□□ -0.71
USP3-219ENST00000561326 ZNF510Q9Y2H8 683 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 HCFC2Q9Y5Z7 792 aa10.62□□□□□ -0.71
USP3-219ENST00000561326 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 A0A1W2PRU2 124 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 BCLAF3A2AJT9 711 aaKnown RBP10.61□□□□□ -0.71
USP3-219ENST00000561326 F5H5T6 163 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 MTSS1O43312 755 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 RFPL2O75678 378 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 STC2O76061 302 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 IFNB1P01574 187 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 RHOP08100 348 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 RHOQP17081 205 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 HOXC13P31276 330 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 AVPR1AP37288 418 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 RGS19P49795 217 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 VSNL1P62760 191 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 SLC7A9P82251 487 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 SLC45A4Q5BKX6 768 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 ADGRF1Q5T601 910 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 PIK3R6Q5UE93 754 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms