RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 IRX4P78413 519 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 DRAP1Q14919 205 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 PTPN20Q4JDL3 420 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 TCP11X2Q5H9J9 407 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 MS4A13Q5J8X5 152 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 SPDYCQ5MJ68 293 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 MBLAC2Q68D91 279 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 CHSY1Q86X52 802 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 FAM71AQ8IYT1 594 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 CFAP52Q8N1V2 620 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 NOX5Q96PH1 765 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 DDX50Q9BQ39 737 aaKnown RBP17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 COX16Q9P0S2 106 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 PILRBQ9UKJ0 227 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 CABIN1Q9Y6J0 2220 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 C4orf47A7E2U8 309 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 TM4SF5O14894 197 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 TIMM44O43615 452 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 CFIP05156 583 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 EEF1GP26641 437 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 KRT9P35527 623 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 ZNF33AQ06730 810 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 LMAN2Q12907 356 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 E2F5Q15329 346 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 PTPRNQ16849 979 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 MPP7Q5T2T1 576 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 PEAR1Q5VY43 1037 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 RAP1GAP2Q684P5 730 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 OR6B2Q6IFH4 312 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 OLFML1Q6UWY5 402 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 RBM43Q6ZSC3 357 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 KIAA0907Q7Z7F0 614 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 LGI2Q8N0V4 545 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 DEFB106AQ8N104 65 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 CARNMT1Q8N4J0 409 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 SLC2A13Q96QE2 648 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 IRX2Q9BZI1 471 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 LHX5Q9H2C1 402 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 FSCN3Q9NQT6 498 aa17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 USP36Q9P275 1121 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 EVLQ9UI08 416 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-208ENST00000561271 HSF2BPO75031 334 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 NDUFS2O75306 463 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 CDH18Q13634 790 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 CT47A1Q5JQC4 288 aaPredicted RBP17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 KLHDC7AQ5VTJ3 777 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 MMS22LQ6ZRQ5 1243 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 C11orf57Q6ZUT1 292 aaPredicted RBP17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 PRCCQ92733 491 aaPredicted RBP17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 SIPA1Q96FS4 1042 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 TOE1Q96GM8 510 aaKnown RBP17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 LMLNQ96KR4 655 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 TMEM245Q9H330 911 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 SYNCQ9H7C4 482 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 TMEM9BQ9NQ34 198 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 ASNSD1Q9NWL6 643 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 DDIT4Q9NX09 232 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 CEP83Q9Y592 693 aa17.82■□□□□ 0.44
CDC42BPB-208ENST00000561271 DAB1O75553 588 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 LUC7L3O95232 432 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 DLDP09622 509 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 UCHL3P15374 230 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 POLR2EP19388 210 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 TACR2P21452 398 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 CD6P30203 668 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 DPP6P42658 865 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 MAPK8P45983 427 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 TPMTP51580 245 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 CDK17Q00537 523 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 CAMK2GQ13555 558 aaPredicted RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 KRT31Q15323 416 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 FSCBQ5H9T9 825 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 EFHC1Q5JVL4 640 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 CDKAL1Q5VV42 579 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 TAF3Q5VWG9 929 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 ZNF557Q8N988 423 aaPredicted RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 OR2T3Q8NH03 318 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 FIBINQ8TAL6 211 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 ENOX1Q8TC92 643 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 DDX1Q92499 740 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 BTN2A3PQ96KV6 586 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 NAA15Q9BXJ9 866 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 NUSAP1Q9BXS6 441 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 VPS16Q9H269 839 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 INTS6Q9UL03 887 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 PLA2G4CQ9UP65 541 aa17.81■□□□□ 0.44
CDC42BPB-208ENST00000561271 F8VZ95 297 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 CDX4O14627 284 aaPredicted RBP17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 ATP5BP06576 529 aaKnown RBP17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 GLI1P08151 1106 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 ADRB1P08588 477 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 CYP11B1P15538 503 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 ENGP17813 658 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 HOXD12P35452 270 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 CSKP41240 450 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 NUMBP49757 651 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 KLK7P49862 253 aa17.8■□□□□ 0.44
CDC42BPB-208ENST00000561271 BPIFB4P59827 614 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms