RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC11A2P49281 568 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 MPP7Q5T2T1 576 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 MBLAC2Q68D91 279 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 SLC23A3Q6PIS1 610 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 SLC47A2Q86VL8 602 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 TMPRSS6Q8IU80 811 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 AHI1Q8N157 1196 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 HJURPQ8NCD3 748 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-204ENST00000561065 C1orf131Q8NDD1 294 aaKnown RBP16.56■□□□□ 0.24
LMX1B-204ENST00000561065 DDX1Q92499 740 aaKnown RBP16.56■□□□□ 0.24
LMX1B-204ENST00000561065 AZIN2Q96A70 460 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 MYO19Q96H55 970 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 PDCL3Q9H2J4 239 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 POPDC2Q9HBU9 364 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 CAPN10Q9HC96 672 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 TMEM9BQ9NQ34 198 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 STIM2Q9P246 746 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 DNAJC12Q9UKB3 198 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 INTS6Q9UL03 887 aaKnown RBP16.56■□□□□ 0.24
LMX1B-204ENST00000561065 PCDHGC3Q9UN70 934 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 SPEGQ15772 3267 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 FOXN3O00409 490 aaPredicted RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 GIPC1O14908 333 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 KCNK5O95279 499 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 TRUB2O95900 331 aaKnown RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 ERBB2P04626 1255 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 ENGP17813 658 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 CD6P30203 668 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 CLCN1P35523 988 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 LMAN2Q12907 356 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 CAMK2GQ13555 558 aaPredicted RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 PTPN20Q4JDL3 420 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 ZC3H12AQ5D1E8 599 aaKnown RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 MS4A13Q5J8X5 152 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 N4BP2L1Q5TBK1 243 aaPredicted RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 FAM183BPQ6ZVS7 135 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 METTL3Q86U44 580 aaKnown RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 MFN1Q8IWA4 741 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 TOE1Q96GM8 510 aaKnown RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 ZNF419Q96HQ0 510 aaPredicted RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 SLC2A13Q96QE2 648 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 PLCB1Q9NQ66 1216 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 WSB2Q9NYS7 404 aaPredicted RBP16.55■□□□□ 0.24
LMX1B-204ENST00000561065 FHOD1Q9Y613 1164 aa16.55■□□□□ 0.24
LMX1B-204ENST00000561065 FRYQ5TBA9 3013 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 TP53BP1Q12888 1972 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 ZBTB24O43167 697 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 SYNCRIPO60506 623 aaKnown RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 IGLV3-19P01714 112 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 CFIP05156 583 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 C7P10643 843 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 HOXD12P35452 270 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 MAPK8P45983 427 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 TPMTP51580 245 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 YWHAZP63104 245 aaKnown RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 FNDC3BQ53EP0 1204 aaKnown RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 DCAF6Q58WW2 860 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 FSCBQ5H9T9 825 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 OTUD1Q5VV17 481 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 RAP1GAP2Q684P5 730 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 PSAPL1Q6NUJ1 521 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 OLFML1Q6UWY5 402 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 MMS22LQ6ZRQ5 1243 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 FAM71AQ8IYT1 594 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 CFAP52Q8N1V2 620 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 OR2I1PQ8NGU4 316 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 OR2T3Q8NH03 318 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 SIPA1Q96FS4 1042 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 PPP1R13BQ96KQ4 1090 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 CNTNAP3BQ96NU0 1288 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 ADAM33Q9BZ11 813 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 CNTNAP3Q9BZ76 1288 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 MTG2Q9H4K7 406 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 ITM2CQ9NQX7 267 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 FANCLQ9NW38 375 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 TMEM51Q9NW97 253 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 ASPMQ8IZT6 3477 aa16.54■□□□□ 0.24
LMX1B-204ENST00000561065 MAP1BP46821 2468 aaKnown RBP16.54■□□□□ 0.24
LMX1B-204ENST00000561065 CAPN9O14815 690 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 TIMM44O43615 452 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 GRAP2O75791 330 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 DLDP09622 509 aaKnown RBP16.53■□□□□ 0.24
LMX1B-204ENST00000561065 MAOBP27338 520 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 PMLP29590 882 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 TPM4P67936 248 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 ARID5AQ03989 594 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 RAPGEF1Q13905 1077 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 SKOR2Q2VWA4 1001 aaPredicted RBP16.53■□□□□ 0.24
LMX1B-204ENST00000561065 KLHDC7AQ5VTJ3 777 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 CDKAL1Q5VV42 579 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 CIR1Q86X95 450 aaPredicted RBP16.53■□□□□ 0.24
LMX1B-204ENST00000561065 DEFB106AQ8N104 65 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 MSANTD4Q8NCY6 345 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 FIBINQ8TAL6 211 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 PRCCQ92733 491 aaPredicted RBP16.53■□□□□ 0.24
LMX1B-204ENST00000561065 MRGPRX3Q96LB0 322 aa16.53■□□□□ 0.24
LMX1B-204ENST00000561065 PCMTD1Q96MG8 357 aaPredicted RBP16.53■□□□□ 0.24
LMX1B-204ENST00000561065 GPR174Q9BXC1 333 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms