RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ARHGAP44Q17R89 818 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 RABGAP1LQ5R372 815 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 ACBD5Q5T8D3 534 aaPredicted RBP14.61□□□□□ -0.07
TPM1-223ENST00000560445 RNF219Q5W0B1 726 aaPredicted RBP14.61□□□□□ -0.07
TPM1-223ENST00000560445 MBLAC2Q68D91 279 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 PSAPL1Q6NUJ1 521 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 DENND1BQ6P3S1 775 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 FIBINQ8TAL6 211 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 ZSWIM1Q9BR11 485 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 LHX5Q9H2C1 402 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 PDCL3Q9H2J4 239 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 FAM204AQ9H8W3 233 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 RRN3Q9NYV6 651 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 GON4LQ3T8J9 2241 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 A0A1B0GTW7 788 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 PATE3B3GLJ2 98 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 E5RJQ4 531 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 F5H5T6 163 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 GOLGA6L22H0YM25 854 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 ARHGAP33O14559 1287 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 DNTTP04053 509 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 PRKCHP24723 683 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 PON1P27169 355 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 CCR1P32246 355 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 MAPK8P45983 427 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 TPMTP51580 245 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 SHC2P98077 582 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 UAP1L1Q3KQV9 507 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 PLEKHG6Q3KR16 790 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 IL27RAQ6UWB1 636 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 KIAA0907Q7Z7F0 614 aaPredicted RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 RNF34Q969K3 372 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 TOE1Q96GM8 510 aaKnown RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 PPP1R13BQ96KQ4 1090 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 FCRL2Q96LA5 508 aaPredicted RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 GTPBP2Q9BX10 602 aaKnown RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 TMEM245Q9H330 911 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 CAPN10Q9HC96 672 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 WSB2Q9NYS7 404 aaPredicted RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 KIAA1522Q9P206 1035 aaPredicted RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 TPX2Q9ULW0 747 aaKnown RBP14.6□□□□□ -0.07
TPM1-223ENST00000560445 NCKAP1Q9Y2A7 1128 aa14.6□□□□□ -0.07
TPM1-223ENST00000560445 WASH3PC4AMC7 463 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 H0Y626 953 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 PES1O00541 588 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 TRUB2O95900 331 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 MOCS2O96007 188 aaPredicted RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 SRPRAP08240 638 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 SLC9A1P19634 815 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 EEF1GP26641 437 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 SULT2A1Q06520 285 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 ZNF252P-AS1Q0IIN9 211 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 VWA3BQ502W6 1294 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 FAM133BQ5BKY9 247 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 MS4A13Q5J8X5 152 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 SH3PXD2AQ5TCZ1 1133 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 ZNF776Q68DI1 518 aaPredicted RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 RFWD3Q6PCD5 774 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 C11orf57Q6ZUT1 292 aaPredicted RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 TAC4Q86UU9 113 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 ADIPOR2Q86V24 386 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 CHSY1Q86X52 802 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 FRMD1Q8N878 549 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 C1orf131Q8NDD1 294 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 ANKRD20A12PQ8NF67 263 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 CLEC4CQ8WTT0 213 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 DNASE2BQ8WZ79 361 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 TTC17Q96AE7 1141 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 SLC39A13Q96H72 371 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 TUBGCP2Q9BSJ2 902 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 MKRN2Q9H000 416 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 NDST4Q9H3R1 872 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 TMEM74BQ9NUR3 256 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 STIM2Q9P246 746 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 DAAM1Q9Y4D1 1078 aa14.59□□□□□ -0.07
TPM1-223ENST00000560445 ATXN2Q99700 1313 aaKnown RBP14.59□□□□□ -0.07
TPM1-223ENST00000560445 CACNA1EQ15878 2313 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 CDX4O14627 284 aaPredicted RBP14.58□□□□□ -0.08
TPM1-223ENST00000560445 PAPSS1O43252 624 aaPredicted RBP14.58□□□□□ -0.08
TPM1-223ENST00000560445 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.08
TPM1-223ENST00000560445 CER1O95813 267 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 C7P10643 843 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 PMLP29590 882 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 ARID5BQ14865 1188 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 TEAD4Q15561 434 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 DCAF6Q58WW2 860 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 N4BP2L1Q5TBK1 243 aaPredicted RBP14.58□□□□□ -0.08
TPM1-223ENST00000560445 SND1Q7KZF4 910 aaKnown RBP eCLIP14.58□□□□□ -0.08
TPM1-223ENST00000560445 SLC41A1Q8IVJ1 513 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 CARNMT1Q8N4J0 409 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 TMEM35BQ8NCS4 154 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 SORCS1Q8WY21 1168 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 GPR174Q9BXC1 333 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 BTBD1Q9H0C5 482 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 SGK2Q9HBY8 427 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 DDIT4Q9NX09 232 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 DNAJC12Q9UKB3 198 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 CLEC4EQ9ULY5 219 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms