RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 RAPH1Q70E73 1250 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PATL1Q86TB9 770 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TMEM110Q86TL2 294 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC51AQ86UW1 340 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SATL1Q86VE3 508 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PALB2Q86YC2 1186 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 THNSL2Q86YJ6 484 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MCATQ8IVS2 390 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TMEM192Q8IY95 271 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RTKN2Q8IZC4 609 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 C4orf33Q8N1A6 199 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC33Q8N5R6 958 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 GALNT11Q8NCW6 608 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RBM15BQ8NDT2 890 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 BAHD1Q8TBE0 780 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TCP10LQ8TDR4 215 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ACTRT2Q8TDY3 377 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 DQX1Q8TE96 717 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC20A1Q8WUM9 679 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 STON2Q8WXE9 905 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CRYGNQ8WXF5 182 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 NKD2Q969F2 451 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SGF29Q96ES7 293 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC74BQ96LY2 380 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 AGAP3Q96P47 875 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 DDX50Q9BQ39 737 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 HAUS8Q9BT25 410 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RUSC1Q9BVN2 902 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC106Q9BWC9 280 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 STRA6Q9BX79 667 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 LGR4Q9BXB1 951 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MAK16Q9BXY0 300 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 UBA5Q9GZZ9 404 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ZHX3Q9H4I2 956 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 DHX33Q9H6R0 707 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TMEM206Q9H813 350 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PALMDQ9NP74 551 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PNPLA8Q9NP80 782 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 AGPAT3Q9NRZ7 376 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RHBDL2Q9NX52 303 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CNOT11Q9UKZ1 510 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ASAP1Q9ULH1 1129 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 NIP7Q9Y221 180 aaKnown RBP eCLIP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ZBTB1Q9Y2K1 713 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MRPS23Q9Y3D9 190 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RABGAP1Q9Y3P9 1069 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 NUMBLQ9Y6R0 609 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MYH11P35749 1972 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SF3B1O75533 1304 aaKnown RBP eCLIP6.16□□□□□ -1.424e-7■■■■■ 34.5
SNRPA1-209ENST00000560307 A0A088AWK7 358 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 IGKV6D-41A0A0C4DH26 115 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 C9IYK1 514 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ZBTB5O15062 677 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CLIC2O15247 247 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 MAFGO15525 162 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 LIASO43766 372 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 LPXNO60711 386 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 RNGTTO60942 597 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ADAM11O75078 769 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ZC3H11AO75152 810 aaKnown RBP eCLIP6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CLEC3AO75596 197 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 TRMUO75648 421 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 PDE5AO76074 875 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 BAG2O95816 211 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 DLGAP3O95886 979 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CAPNS1P04632 268 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ITGAVP06756 1048 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 C8BP07358 591 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 GOLGA8HP0CJ92 632 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 FGFR1P11362 822 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ETS2P15036 469 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CD68P34810 354 aaPredicted RBP6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CPOXP36551 454 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 STAT3P40763 770 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 PIK3CAP42336 1068 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 VPS41P49754 854 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CDK9P50750 372 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 TUBA4AP68366 448 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF543Q08ER8 600 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 DDB1Q16531 1140 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 BCL2A1Q16548 175 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 P3H1Q32P28 736 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 NADK2Q4G0N4 442 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 RARS2Q5T160 578 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 STXBP5Q5T5C0 1151 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ZBTB37Q5TC79 503 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 LRRC38Q5VT99 294 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 OLFML2BQ68BL8 750 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC6A19Q695T7 634 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CYP4F22Q6NT55 531 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 RINT1Q6NUQ1 792 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ARCQ7LC44 396 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 CATSPER3Q86XQ3 398 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 HID1Q8IV36 788 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 TERB1Q8NA31 727 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 ADCY4Q8NFM4 1077 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 UBASH3BQ8TF42 649 aa6.15□□□□□ -1.42
SNRPA1-209ENST00000560307 GDPD5Q8WTR4 605 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms