RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 GFRA2O00451 464 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 CEP104O60308 925 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 LRIG2O94898 1065 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 GOT1P17174 413 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 TACR2P21452 398 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 HOXC13P31276 330 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 SLC6A4P31645 630 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 GGCXP38435 758 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 ARL4AP40617 200 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 CETN2P41208 172 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 AUHQ13825 339 aaKnown RBP14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 C5orf22Q49AR2 442 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 SEL1L2Q5TEA6 688 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 RAP1GAP2Q684P5 730 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 OTOP3Q7RTS5 596 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 C14orf80Q86SX3 495 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 CCDC50Q8IVM0 306 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 CPXM2Q8N436 756 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 E2F7Q96AV8 911 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 RSPRY1Q96DX4 576 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 CSPG4P5Q96PW8 444 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 CALN1Q9BXU9 219 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 OSBPL8Q9BZF1 889 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 EPS15L1Q9UBC2 864 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 PPARGC1AQ9UBK2 798 aaKnown RBP14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 NEU3Q9UQ49 428 aa14.1□□□□□ -0.15
HMBOX1-213ENST00000560269 DRGXA6NNA5 263 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 E9PAM4 449 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 F5H5T6 163 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 CREB3O43889 395 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 SRGAP2O75044 1071 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 VIPR2P41587 438 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 MMRN1Q13201 1228 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 TUBB2AQ13885 445 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 DPYSQ14117 519 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 ANKRD20A8PQ5CZ79 823 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 FBXL22Q6P050 247 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 LRRC31Q6UY01 552 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 RFX8Q6ZV50 586 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 CHSY1Q86X52 802 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 BBS7Q8IWZ6 715 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 ACTRT1Q8TDG2 376 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 BPIFB1Q8TDL5 484 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 OTUB2Q96DC9 234 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 TBC1D31Q96DN5 1066 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 LRRC3BQ96PB8 259 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 RNF157Q96PX1 679 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 TUBB2BQ9BVA1 445 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 PRDM16Q9HAZ2 1276 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 ZFP14Q9HCL3 533 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 TBC1D14Q9P2M4 693 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 VANGL2Q9ULK5 521 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 DOCK4Q8N1I0 1966 aa14.09□□□□□ -0.15
HMBOX1-213ENST00000560269 PRUNE2Q8WUY3 3088 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 HEPACAM2A8MVW5 462 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 ZNF185O15231 689 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 FGF10O15520 208 aaPredicted RBP14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 URI1O94763 535 aaPredicted RBP14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 CHKAP35790 457 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 TPI1P60174 286 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 SMAD2Q15796 467 aaKnown RBP14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 PUS10Q3MIT2 529 aaKnown RBP14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 TANGO2Q6ICL3 276 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 RFWD3Q6PCD5 774 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 SLC13A5Q86YT5 568 aaPredicted RBP14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 CREG2Q8IUH2 290 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 LGI2Q8N0V4 545 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 MAFAQ8NHW3 353 aaPredicted RBP14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 PCDH19Q8TAB3 1148 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 IGSF8Q969P0 613 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 ELSPBP1Q96BH3 223 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 MYEOVQ96EZ4 313 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 HERPUD2Q9BSE4 406 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 RETREG1Q9H6L5 497 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 ARHGEF4Q9NR80 690 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 RNF14Q9UBS8 474 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 CDC23Q9UJX2 597 aa14.08□□□□□ -0.16
HMBOX1-213ENST00000560269 WASH4PA8MWX3 477 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 ANHXE9PGG2 379 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 SLC9A3R1O14745 358 aaPredicted RBP14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 SCAMP3O14828 347 aaKnown RBP14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 DCLK1O15075 740 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 ECI2O75521 394 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 KRT10P13645 584 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 ERCC2P18074 760 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 AMPD1P23109 780 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 EPHB2P29323 1055 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 KLF1Q13351 362 aaPredicted RBP14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 TFDP2Q14188 446 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 DNTTIP2Q5QJE6 756 aaKnown RBP14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 RABGAP1LQ5R372 815 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 TTC39BQ5VTQ0 682 aaPredicted RBP14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 SLC9A4Q6AI14 798 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 VITQ6UXI7 678 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 BBS12Q6ZW61 710 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 MTSS1LQ765P7 747 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 RFX6Q8HWS3 928 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 MFSD6LQ8IWD5 586 aa14.07□□□□□ -0.16
HMBOX1-213ENST00000560269 PQLC3Q8N755 202 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms