RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 KIAA1324Q6UXG2 1013 aaKnown RBP21.46■■□□□ 1.03
PSEN1-225ENST00000560005 ZNF662Q6ZS27 426 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 NUP93Q8N1F7 819 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 PPM1KQ8N3J5 372 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 PDZD8Q8NEN9 1154 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 WBP2Q969T9 261 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 MRGPRX1Q96LB2 322 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 GABRG3Q99928 467 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 DPEP3Q9H4B8 488 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 CCSER2Q9H7U1 834 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 CHORDC1Q9UHD1 332 aaPredicted RBP21.46■■□□□ 1.03
PSEN1-225ENST00000560005 CLDN5O00501 218 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 PTPN1P18031 435 aaKnown RBP21.45■■□□□ 1.02
PSEN1-225ENST00000560005 BPIFB4P59827 614 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 APBA1Q02410 837 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 ARHGAP44Q17R89 818 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 HGSNATQ68CP4 663 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 TMPRSS7Q7RTY8 843 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 OR6B3Q8NGW1 331 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 PPP1R13BQ96KQ4 1090 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 IL21RQ9HBE5 538 aa21.45■■□□□ 1.02
PSEN1-225ENST00000560005 TRMT1Q9NXH9 659 aaKnown RBP21.45■■□□□ 1.02
PSEN1-225ENST00000560005 KIAA1522Q9P206 1035 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-225ENST00000560005 KALRNO60229 2985 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 A0A1B0GTW7 788 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 MEI4A8MW99 385 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 RTN3O95197 1032 aaPredicted RBP21.44■■□□□ 1.02
PSEN1-225ENST00000560005 ATICP31939 592 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 KIF11P52732 1056 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 YWHAEP62258 255 aaKnown RBP21.44■■□□□ 1.02
PSEN1-225ENST00000560005 GJB7Q6PEY0 223 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 MARCH9Q86YJ5 346 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 ZCCHC9Q8N567 271 aaKnown RBP21.44■■□□□ 1.02
PSEN1-225ENST00000560005 OVCA2Q8WZ82 227 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 B3GNT5Q9BYG0 378 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 TSGA10Q9BZW7 698 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 HAUS4Q9H6D7 363 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 CACNA2D2Q9NY47 1150 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 DKK4Q9UBT3 224 aa21.44■■□□□ 1.02
PSEN1-225ENST00000560005 GOLGA4Q13439 2230 aaKnown RBP21.43■■□□□ 1.02
PSEN1-225ENST00000560005 PRRT4C9JH25 899 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 NEDD8-MDP1E9PL57 170 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 FOXN3O00409 490 aaPredicted RBP21.43■■□□□ 1.02
PSEN1-225ENST00000560005 VNN1O95497 513 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 ASS1P00966 412 aaKnown RBP21.43■■□□□ 1.02
PSEN1-225ENST00000560005 CD6P30203 668 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 ARID5AQ03989 594 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
PSEN1-225ENST00000560005 KIAA1328Q86T90 577 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 ARHGEF19Q8IW93 802 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 REXO1L1PQ8IX06 675 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 C17orf53Q8N3J3 647 aaPredicted RBP21.43■■□□□ 1.02
PSEN1-225ENST00000560005 SCAMP5Q8TAC9 235 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 ADAM32Q8TC27 787 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 DNASE2BQ8WZ79 361 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 SHC3Q92529 594 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 CRELD1Q96HD1 420 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 NACA2Q9H009 215 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 MIR1-1HGQ9H1L0 117 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 GAREM1Q9H706 876 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 RRAGDQ9NQL2 400 aaPredicted RBP21.43■■□□□ 1.02
PSEN1-225ENST00000560005 TOR4AQ9NXH8 423 aa21.43■■□□□ 1.02
PSEN1-225ENST00000560005 CACNG3O60359 315 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 TACC1O75410 805 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 P4HA1P13674 534 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 TYRP14679 529 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 TUBP50607 506 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 CYP4F3Q08477 520 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 SLC18A3Q16572 532 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 ASTE1Q2TB18 679 aaPredicted RBP21.42■■□□□ 1.02
PSEN1-225ENST00000560005 SNX30Q5VWJ9 437 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 FAM71AQ8IYT1 594 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 B3GALNT2Q8NCR0 500 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 TOE1Q96GM8 510 aaKnown RBP21.42■■□□□ 1.02
PSEN1-225ENST00000560005 XPO6Q96QU8 1125 aaKnown RBP21.42■■□□□ 1.02
PSEN1-225ENST00000560005 KCNK16Q96T55 309 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 BBS2Q9BXC9 721 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 PRDM16Q9HAZ2 1276 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 TM7SF3Q9NS93 570 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 GMIPQ9P107 970 aa21.42■■□□□ 1.02
PSEN1-225ENST00000560005 FNDC3AQ9Y2H6 1198 aaKnown RBP21.42■■□□□ 1.02
PSEN1-225ENST00000560005 WASH3PC4AMC7 463 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 KRT86O43790 486 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 CILPO75339 1184 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 ATXN1LP0C7T5 689 aaKnown RBP21.41■■□□□ 1.02
PSEN1-225ENST00000560005 NCAM1P13591 858 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 TPGS1Q6ZTW0 290 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 TTC39CQ8N584 583 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 BAHD1Q8TBE0 780 aaPredicted RBP21.41■■□□□ 1.02
PSEN1-225ENST00000560005 TATDN2Q93075 761 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 DESI2Q9BSY9 194 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.41■■□□□ 1.02
PSEN1-225ENST00000560005 GPR174Q9BXC1 333 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 MYO1AQ9UBC5 1043 aa21.41■■□□□ 1.02
PSEN1-225ENST00000560005 ATP8B3O60423 1300 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 TRABD2BA6NFA1 517 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 GOLGA8CPA6NN73 597 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 A8MXQ7 604 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 CLSTN1O94985 981 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 STAU1O95793 577 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms