RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ENOSF1Q7L5Y1 443 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 UNC45BQ8IWX7 931 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 DEFB106AQ8N104 65 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 CARNMT1Q8N4J0 409 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 GPT2Q8TD30 523 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 GOLGA1Q92805 767 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 SIPA1Q96FS4 1042 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 NUP62CLQ9H1M0 184 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 PRSS16Q9NQE7 514 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 COX16Q9P0S2 106 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 FHOD1Q9Y613 1164 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 GTPBP10A4D1E9 387 aaKnown RBP18.39■□□□□ 0.53
HDDC3-205ENST00000559898 SYNCRIPO60506 623 aaKnown RBP18.39■□□□□ 0.53
HDDC3-205ENST00000559898 TFE3P19532 575 aaPredicted RBP18.39■□□□□ 0.53
HDDC3-205ENST00000559898 GGCXP38435 758 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 KLK7P49862 253 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 CAMK2GQ13555 558 aaPredicted RBP18.39■□□□□ 0.53
HDDC3-205ENST00000559898 PTPN20Q4JDL3 420 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 VWA3BQ502W6 1294 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 OTUD1Q5VV17 481 aaPredicted RBP18.39■□□□□ 0.53
HDDC3-205ENST00000559898 MFN1Q8IWA4 741 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 LGI2Q8N0V4 545 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 DEFB124Q8NES8 71 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 AZIN2Q96A70 460 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 PPP1R13BQ96KQ4 1090 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 MRGPRX3Q96LB0 322 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 SERPINB11Q96P15 392 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 TUBGCP2Q9BSJ2 902 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 GTPBP2Q9BX10 602 aaKnown RBP18.39■□□□□ 0.53
HDDC3-205ENST00000559898 NDST4Q9H3R1 872 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 POPDC2Q9HBU9 364 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 PCDHGC3Q9UN70 934 aa18.39■□□□□ 0.53
HDDC3-205ENST00000559898 CAPN9O14815 690 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 NDUFS2O75306 463 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
HDDC3-205ENST00000559898 SPINK2P20155 84 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 TACR2P21452 398 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 PMLP29590 882 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 CSKP41240 450 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 YWHAZP63104 245 aaKnown RBP18.38■□□□□ 0.53
HDDC3-205ENST00000559898 MEA1Q16626 185 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 DUOXA1Q1HG43 343 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 C2CD6Q53TS8 623 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 OLFML1Q6UWY5 402 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 METTL3Q86U44 580 aaKnown RBP18.38■□□□□ 0.53
HDDC3-205ENST00000559898 RGL4Q8IZJ4 473 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 APCDD1Q8J025 514 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 AHI1Q8N157 1196 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 HJURPQ8NCD3 748 aaPredicted RBP18.38■□□□□ 0.53
HDDC3-205ENST00000559898 OR2T3Q8NH03 318 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 FIBINQ8TAL6 211 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 WFIKKN2Q8TEU8 576 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 PRCCQ92733 491 aaPredicted RBP18.38■□□□□ 0.53
HDDC3-205ENST00000559898 SLC2A13Q96QE2 648 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 NUSAP1Q9BXS6 441 aaKnown RBP18.38■□□□□ 0.53
HDDC3-205ENST00000559898 ANLNQ9NQW6 1124 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 TAB2Q9NYJ8 693 aa18.38■□□□□ 0.53
HDDC3-205ENST00000559898 NPC1O15118 1278 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 ZBTB24O43167 697 aaPredicted RBP18.37■□□□□ 0.53
HDDC3-205ENST00000559898 TIMM44O43615 452 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 SERPINF2P08697 491 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 ACSL1P33121 698 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 RPS14P62263 151 aaKnown RBP18.37■□□□□ 0.53
HDDC3-205ENST00000559898 FAM193AP78312 1265 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 BNC1Q01954 994 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 ARID5AQ03989 594 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 NNTQ13423 1086 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 DRAP1Q14919 205 aaPredicted RBP18.37■□□□□ 0.53
HDDC3-205ENST00000559898 DCAF12L1Q5VU92 463 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 OR6B2Q6IFH4 312 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 OR52K2Q8NGK3 314 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 PRMT1Q99873 361 aaKnown RBP18.37■□□□□ 0.53
HDDC3-205ENST00000559898 C6orf106Q9H6K1 298 aaPredicted RBP18.37■□□□□ 0.53
HDDC3-205ENST00000559898 SLC6A14Q9UN76 642 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 SNX10Q9Y5X0 201 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 TMEM131Q92545 1883 aa18.37■□□□□ 0.53
HDDC3-205ENST00000559898 KCNU1A8MYU2 1149 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 I6L893 689 aaPredicted RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 PLXNA2O75051 1894 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 LUC7L3O95232 432 aaKnown RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 DLDP09622 509 aaKnown RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 POLR2EP19388 210 aaKnown RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 ERCC5P28715 1186 aaPredicted RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 ZNF445P59923 1031 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 CENPCQ03188 943 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 PITRM1Q5JRX3 1037 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 MPP7Q5T2T1 576 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 KLHDC7AQ5VTJ3 777 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 TAF3Q5VWG9 929 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 DAB2IPQ5VWQ8 1189 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 CLEC17AQ6ZS10 378 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 BEND5Q7L4P6 421 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 C14orf80Q86SX3 495 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 FAM71AQ8IYT1 594 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 ZCCHC9Q8N567 271 aaKnown RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 DDX1Q92499 740 aaKnown RBP18.36■□□□□ 0.53
HDDC3-205ENST00000559898 IGSF8Q969P0 613 aa18.36■□□□□ 0.53
HDDC3-205ENST00000559898 TTC17Q96AE7 1141 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms