RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 HLA-FP30511 346 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 MAT2AP31153 395 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 LSSP48449 732 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 NXPH1P58417 271 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 ERVPABLB-1P60509 514 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 E2F5Q15329 346 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 SURF1Q15526 300 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 POM121L1PQ3SYA9 428 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 C4orf17Q53FE4 359 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 RILPL1Q5EBL4 403 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 ARL6IP4Q66PJ3 421 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 KANSL1Q7Z3B3 1105 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 MMAAQ8IVH4 418 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 LSMEM2Q8N112 164 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 C12orf29Q8N999 325 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 EXTL1Q92935 676 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 TNIP3Q96KP6 325 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 AK8Q96MA6 479 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 OMDQ99983 421 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 NEUROG2Q9H2A3 272 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 PABPC3Q9H361 631 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 ABCB8Q9NUT2 735 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 HMGXB4Q9UGU5 601 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 SCML2Q9UQR0 700 aa9.36□□□□□ -0.91
SNRPA1-208ENST00000559686 DOPEY2Q9Y3R5 2298 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 A0A1B0GVM2 712 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 SLC12A8A0AV02 714 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 LRRC72A6NJI9 287 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 TIMM44O43615 452 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 GAP43P17677 238 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 CYP2J2P51589 502 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 ZBTB16Q05516 673 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 BIRC3Q13489 604 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 UBAP2LQ14157 1087 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 SGO2Q562F6 1265 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 SLC45A4Q5BKX6 768 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 SCD5Q86SK9 330 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 ZC3H3Q8IXZ2 948 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 CACTIN-AS1Q8N1I8 211 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 OR2T34Q8NGX1 318 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 SNRNP27Q8WVK2 155 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 ZNF516Q92618 1163 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 DNAJC19Q96DA6 116 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 EPSTI1Q96J88 318 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 CGRRF1Q99675 332 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 MYOCQ99972 504 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 DCLK3Q9C098 648 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 ABCG4Q9H172 646 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 NYNRINQ9P2P1 1898 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 SEL1LQ9UBV2 794 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 CA5BQ9Y2D0 317 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 ZNF510Q9Y2H8 683 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 BSNQ9UPA5 3926 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 RELNP78509 3460 aa9.35□□□□□ -0.91
SNRPA1-208ENST00000559686 CLIC2O15247 247 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SUV39H1O43463 412 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SLC26A4O43511 780 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SIN3BO75182 1162 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 FAM200BP0CF97 657 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 RALAP11233 206 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 PABPC1P11940 636 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 HOXD9P28356 352 aaPredicted RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 RXRGP48443 463 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 PSMD8P48556 350 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 CASP4P49662 377 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 NUMBP49757 651 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 NDST1P52848 882 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 PPP2CBP62714 309 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 PPP2CAP67775 309 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 COG7P83436 770 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 TLE1Q04724 770 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SRSF6Q13247 344 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 CST6Q15828 149 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SNRNP35Q16560 246 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 ZNF699Q32M78 642 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 LINC00303Q3SY05 128 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 CDCP2Q5VXM1 449 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 MBLAC2Q68D91 279 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 CRTC1Q6UUV9 634 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 USP53Q70EK8 1073 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 RSRC2Q7L4I2 434 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 ADIPOR2Q86V24 386 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SLC25A45Q8N413 288 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 OXR1Q8N573 874 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 ANKK1Q8NFD2 765 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 OR14C36Q8NHC7 312 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 WFDC5Q8TCV5 224 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 ATXN7L3BQ96GX2 97 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 SLC2A11Q9BYW1 496 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 XYLT2Q9H1B5 865 aa9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 RSPH9Q9H1X1 276 aaPredicted RBP9.34□□□□□ -0.91
SNRPA1-208ENST00000559686 FBRSQ9HAH7 460 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms