RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZNF217O75362 1048 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 GFPT2O94808 682 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 MMEP08473 750 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 PABPC1P11940 636 aaKnown RBP13.05□□□□□ -0.32
LRRC28-214ENST00000559433 IL12RB1P42701 662 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 UBXN1Q04323 297 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 ZNF234Q14588 700 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 NCAPHQ15003 741 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 SF3A2Q15428 464 aaKnown RBP13.05□□□□□ -0.32
LRRC28-214ENST00000559433 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 MS4A13Q5J8X5 152 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 RAP1GAP2Q684P5 730 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 SLC36A4Q6YBV0 504 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 CHST9Q7L1S5 443 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 CYP2U1Q7Z449 544 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 CHSY1Q86X52 802 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 ERICH1Q86X53 443 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 ZDHHC17Q8IUH5 632 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 LGI2Q8N0V4 545 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 AHI1Q8N157 1196 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 FRMD1Q8N878 549 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.05□□□□□ -0.32
LRRC28-214ENST00000559433 ATP6V0D2Q8N8Y2 350 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 ZNF557Q8N988 423 aaPredicted RBP13.05□□□□□ -0.32
LRRC28-214ENST00000559433 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 WFDC5Q8TCV5 224 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 EPS8L1Q8TE68 723 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 DDX1Q92499 740 aaKnown RBP13.05□□□□□ -0.32
LRRC28-214ENST00000559433 MYEOVQ96EZ4 313 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 BTN2A3PQ96KV6 586 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 SPAG5Q96R06 1193 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 SLC6A17Q9H1V8 727 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 HSD3B7Q9H2F3 369 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 CD248Q9HCU0 757 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 DAAM1Q9Y4D1 1078 aa13.05□□□□□ -0.32
LRRC28-214ENST00000559433 NYNRINQ9P2P1 1898 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 AP5Z1O43299 807 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 NDUFS2O75306 463 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 SLC2A3P11169 496 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 ABCB4P21439 1286 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 TACR2P21452 398 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 PRKCHP24723 683 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CCR1P32246 355 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CD70P32970 193 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 SOX5P35711 763 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 JAM2P57087 298 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 RNASE9P60153 205 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 RPS24P62847 133 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 NME3Q13232 169 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CDH18Q13634 790 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 ENPP2Q13822 863 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 FUT11Q495W5 492 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 NAA35Q5VZE5 725 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 RNF43Q68DV7 783 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 ZNF677Q86XU0 584 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 TMEFF1Q8IYR6 380 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 ZNF397Q8NF99 534 aaPredicted RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 SLC20A1Q8WUM9 679 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 PIGKQ92643 395 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
LRRC28-214ENST00000559433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 NOCTQ9UK39 431 aaKnown RBP13.04□□□□□ -0.32
LRRC28-214ENST00000559433 BCLAF3A2AJT9 711 aaKnown RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 DCDC2BA2VCK2 349 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 KCNU1A8MYU2 1149 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 F5H5T6 163 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 M0QYT0 321 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 GDF9O60383 454 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 EPHX1P07099 455 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 ACADMP11310 421 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 NOS2P35228 1153 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 STAT1P42224 750 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 DPP6P42658 865 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 MATKP42679 507 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 GABRB2P47870 512 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 NOMO3P69849 1222 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 CDR2Q01850 454 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 EIF4EBP2Q13542 120 aaPredicted RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 PLA2G2CQ5R387 149 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms