RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SMAD2Q15796 467 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 CCDC137Q6PK04 289 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 TEKT4Q8WW24 435 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 USP13Q92995 863 aaPredicted RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 FCRL2Q96LA5 508 aaPredicted RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 ASB16Q96NS5 453 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 SMPD4Q9NXE4 827 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 COX16Q9P0S2 106 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 CCL26Q9Y258 94 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 TLR6Q9Y2C9 796 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 TJP3O95049 919 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 DESP17661 470 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 CXCR3P49682 368 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 TBX4P57082 545 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 COG7P83436 770 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 ADCY2Q08462 1091 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 CCNG2Q16589 344 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 SMTNL2Q2TAL5 461 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 FAM78AQ5JUQ0 283 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 ZFYVE27Q5T4F4 411 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 JAMLQ86YT9 394 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 SMARCD2Q92925 531 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 WBP2Q969T9 261 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 FUT8Q9BYC5 575 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 TRPV4Q9HBA0 871 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 TDP1Q9NUW8 608 aa17.12■□□□□ 0.33
TPM1-219ENST00000559397 R3HDM2Q9Y2K5 976 aaKnown RBP17.12■□□□□ 0.33
TPM1-219ENST00000559397 ZFP37Q9Y6Q3 630 aaPredicted RBP17.12■□□□□ 0.33
TPM1-219ENST00000559397 ESYT3A0FGR9 886 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 GREM1O60565 184 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 LAMP2P13473 410 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 KRT10P13645 584 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 TCF3P15923 654 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 GBP2P32456 591 aaPredicted RBP17.11■□□□□ 0.33
TPM1-219ENST00000559397 KCNQ1P51787 676 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 KPNA1P52294 538 aaPredicted RBP17.11■□□□□ 0.33
TPM1-219ENST00000559397 DRG2P55039 364 aaKnown RBP17.11■□□□□ 0.33
TPM1-219ENST00000559397 RING1Q06587 406 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 CUL1Q13616 776 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 TRADDQ15628 312 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 DUPD1Q68J44 220 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 PTCRAQ6ISU1 281 aaPredicted RBP17.11■□□□□ 0.33
TPM1-219ENST00000559397 GSPT2Q8IYD1 628 aaKnown RBP17.11■□□□□ 0.33
TPM1-219ENST00000559397 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 C1orf54Q8WWF1 131 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.33
TPM1-219ENST00000559397 PLD4Q96BZ4 506 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 ERP44Q9BS26 406 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 RAB17Q9H0T7 212 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 TMEM51Q9NW97 253 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
TPM1-219ENST00000559397 KCNU1A8MYU2 1149 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 LEFTY2O00292 366 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 MAP2K7O14733 419 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 STC2O76061 302 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 HMBSP08397 361 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 FCARP24071 287 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 PPP2R5DQ14738 602 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 PUS10Q3MIT2 529 aaKnown RBP17.1■□□□□ 0.33
TPM1-219ENST00000559397 ZC3H12AQ5D1E8 599 aaKnown RBP17.1■□□□□ 0.33
TPM1-219ENST00000559397 EMBQ6PCB8 327 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 DRICH1Q6PGQ1 229 aaPredicted RBP17.1■□□□□ 0.33
TPM1-219ENST00000559397 OTOP3Q7RTS5 596 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 FAM131BQ86XD5 332 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 VSIG1Q86XK7 387 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 FAM71BQ8TC56 605 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 RSPRY1Q96DX4 576 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 PHF7Q9BWX1 381 aaPredicted RBP17.1■□□□□ 0.33
TPM1-219ENST00000559397 ANLNQ9NQW6 1124 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 UTP11Q9Y3A2 253 aaKnown RBP17.1■□□□□ 0.33
TPM1-219ENST00000559397 I6L893 689 aaPredicted RBP17.1■□□□□ 0.33
TPM1-219ENST00000559397 ECHS1P30084 290 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 CCR1P32246 355 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 KCNJ1P48048 391 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 ZNF77Q15935 545 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 BRMS1LQ5PSV4 323 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 SND1Q7KZF4 910 aaKnown RBP eCLIP17.1■□□□□ 0.33
TPM1-219ENST00000559397 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 KCTD6Q8NC69 237 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 SH3RF2Q8TEC5 729 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 ATG4AQ8WYN0 398 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 CAVIN3Q969G5 261 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 LRRC3BQ96PB8 259 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 KIF9Q9HAQ2 790 aa17.1■□□□□ 0.33
TPM1-219ENST00000559397 SASH3O75995 380 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 KLKB1P03952 638 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 CD48P09326 243 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 IRF1P10914 325 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 VIPR2P41587 438 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 USP4Q13107 963 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 PDK2Q15119 407 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms