RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 GALNT4Q8N4A0 578 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 TERB1Q8NA31 727 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 RNF125Q96EQ8 232 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 ADGRE3Q9BY15 652 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 ASIC5Q9NY37 505 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 B3GNT3Q9Y2A9 372 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 NPIPB8E9PQR5 432 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 EIF5BO60841 1220 aaKnown RBP12.22□□□□□ -0.45
CASC4-208ENST00000559151 NDUFS1P28331 727 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 STAT6P42226 847 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 CASP2P42575 452 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 CASP6P55212 293 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 ZNF169Q14929 603 aaPredicted RBP12.22□□□□□ -0.45
CASC4-208ENST00000559151 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 LRRC8DQ7L1W4 858 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 HS6ST2Q96MM7 605 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 RNF26Q9BY78 433 aaPredicted RBP12.22□□□□□ -0.45
CASC4-208ENST00000559151 ALG13Q9NP73 1137 aaKnown RBP12.22□□□□□ -0.45
CASC4-208ENST00000559151 MTMR4Q9NYA4 1195 aa12.22□□□□□ -0.45
CASC4-208ENST00000559151 GCOM1H8Y6P7 765 aaPredicted RBP12.21□□□□□ -0.45
CASC4-208ENST00000559151 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
CASC4-208ENST00000559151 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
CASC4-208ENST00000559151 GPR68Q15743 365 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 CNGA3Q16281 694 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 ZNF804AQ7Z570 1209 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 SRFBP1Q8NEF9 429 aaKnown RBP12.21□□□□□ -0.45
CASC4-208ENST00000559151 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 KCNJ9Q92806 393 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 ZBTB10Q96DT7 871 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 MASTLQ96GX5 879 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 HTATIP2Q9BUP3 242 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 KRTAP4-8Q9BYQ9 185 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 THAP1Q9NVV9 213 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
CASC4-208ENST00000559151 ITIH6Q6UXX5 1313 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 PRYO14603 147 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 ZNF202O95125 648 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 WEE2P0C1S8 567 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 ABCD3P28288 659 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 SLC37A1P57057 533 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 TDGQ13569 410 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 SLC29A4Q7RTT9 530 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 UCMAQ8WVF2 138 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 GPR78Q96P69 363 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
CASC4-208ENST00000559151 NPIPB13A6NJU9 1138 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 NPIPB5A8MRT5 1133 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 NPIPB4C9JG80 1138 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 CLIC1O00299 241 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 MGST3O14880 152 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 MT-CO3P00414 261 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 ATF7P17544 494 aaPredicted RBP12.19□□□□□ -0.46
CASC4-208ENST00000559151 SHC2P98077 582 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 B4GALNT1Q00973 533 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 RUNDC3AQ59EK9 446 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 HECTD2Q5U5R9 776 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 TMEM88Q6PEY1 159 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 RFFLQ8WZ73 363 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 TMX4Q9H1E5 349 aaPredicted RBP12.19□□□□□ -0.46
CASC4-208ENST00000559151 SYNPO2LQ9H987 977 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 AASSQ9UDR5 926 aa12.19□□□□□ -0.46
CASC4-208ENST00000559151 TTC34A8MYJ7 566 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 ADH4P08319 380 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 TNNT1P13805 278 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
CASC4-208ENST00000559151 MAN1A1P33908 653 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 GGT5P36269 586 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 CCT4P50991 539 aaKnown RBP12.18□□□□□ -0.46
CASC4-208ENST00000559151 SIM1P81133 766 aaPredicted RBP12.18□□□□□ -0.46
CASC4-208ENST00000559151 BAK1Q16611 211 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 NFIL3Q16649 462 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 FAM153CQ494X1 144 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 GPATCH4Q5T3I0 446 aaKnown RBP12.18□□□□□ -0.46
CASC4-208ENST00000559151 DCDC5Q6ZRR9 648 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 LSM14AQ8ND56 463 aaKnown RBP12.18□□□□□ -0.46
CASC4-208ENST00000559151 KRTAP4-12Q9BQ66 201 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 HDHD5Q9BXW7 423 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 OSBPL5Q9H0X9 879 aaPredicted RBP12.18□□□□□ -0.46
CASC4-208ENST00000559151 TAOK3Q9H2K8 898 aa12.18□□□□□ -0.46
CASC4-208ENST00000559151 PRPH2P23942 346 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 AVPR2P30518 371 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 VPS41P49754 854 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
CASC4-208ENST00000559151 KCNB1Q14721 858 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 ERCC6LQ2NKX8 1250 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 TSTD2Q5T7W7 516 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 ADGRF3Q8IZF5 1079 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 LARP4BQ92615 738 aaKnown RBP12.17□□□□□ -0.46
CASC4-208ENST00000559151 DAZAP1Q96EP5 407 aaKnown RBP12.17□□□□□ -0.46
CASC4-208ENST00000559151 RNFT2Q96EX2 444 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 APOPT1Q96IL0 206 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
CASC4-208ENST00000559151 CTDSP1Q9GZU7 261 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 MROH8Q9H579 483 aa12.17□□□□□ -0.46
CASC4-208ENST00000559151 OLA1Q9NTK5 396 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms