RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 P2RY11Q96G91 374 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 RPRD1AQ96P16 312 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-208ENST00000558970 DHX35Q9H5Z1 703 aaKnown RBP12.86□□□□□ -0.35
GABPB1-208ENST00000558970 FZD10Q9ULW2 581 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 CAPN6Q9Y6Q1 641 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 PIAS3Q9Y6X2 628 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 USP27XA6NNY8 438 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 E9PAM4 449 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 ARNTLO00327 626 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 ADH1CP00326 375 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 CYBBP04839 570 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 ALADP13716 330 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 TYRP14679 529 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 CD72P21854 359 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 ARHGAP25P42331 645 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 DNA2P51530 1060 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 KDSRQ06136 332 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 ATP13A4Q4VNC1 1196 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 RWDD4Q6NW29 188 aaKnown RBP12.85□□□□□ -0.35
GABPB1-208ENST00000558970 CYP4V2Q6ZWL3 525 aaPredicted RBP12.85□□□□□ -0.35
GABPB1-208ENST00000558970 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 C17orf53Q8N3J3 647 aaPredicted RBP12.85□□□□□ -0.35
GABPB1-208ENST00000558970 CARNMT1Q8N4J0 409 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 NIPA2Q8N8Q9 360 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 IGSF8Q969P0 613 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 OTUB2Q96DC9 234 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 KCNH6Q9H252 994 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
GABPB1-208ENST00000558970 MPP6Q9NZW5 540 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 OR12D3Q9UGF7 316 aa12.85□□□□□ -0.35
GABPB1-208ENST00000558970 TYW5A2RUC4 315 aaKnown RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 GRID2IPA4D2P6 1211 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 TRIM24O15164 1050 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 PALMO75781 387 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 LATS1O95835 1130 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 FTCDO95954 541 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 RARAP10276 462 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 GJA4P35212 333 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 SLC6A11P48066 632 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 GAD2Q05329 585 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 NR1H3Q13133 447 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 ACAP1Q15027 740 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 MPPE1Q53F39 396 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 TPRG1Q6ZUI0 275 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 TFAP2DQ7Z6R9 452 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 SIX5Q8N196 739 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 CPXM2Q8N436 756 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 CHFRQ96EP1 664 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 TMA16Q96EY4 203 aaKnown RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 KCTD15Q96SI1 283 aaPredicted RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 DDX50Q9BQ39 737 aaKnown RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 IRX2Q9BZI1 471 aaPredicted RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 CLEC4EQ9ULY5 219 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 PACSIN2Q9UNF0 486 aaPredicted RBP12.84□□□□□ -0.35
GABPB1-208ENST00000558970 ALG6Q9Y672 507 aa12.84□□□□□ -0.35
GABPB1-208ENST00000558970 NYNRINQ9P2P1 1898 aaKnown RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 SPECC1L-ADORA2AF8WAN1 911 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 CNTN5O94779 1100 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 MAN1A1P33908 653 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 PCK1P35558 622 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 MARCKSL1P49006 195 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 HADHBP55084 474 aaKnown RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 MLLT6P55198 1093 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 PFKPQ01813 784 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 KRT81Q14533 505 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 PON2Q15165 354 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 LLGL1Q15334 1064 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 IFI16Q16666 785 aaKnown RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 SLC44A4Q53GD3 710 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 RABGAP1LQ5R372 815 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 FYB2Q5VWT5 728 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 C11orf63Q6NUN7 778 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 TXNDC11Q6PKC3 985 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 LRRC31Q6UY01 552 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 FAM217AQ8IXS0 508 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 KIAA1524Q8TCG1 905 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 AZIN2Q96A70 460 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 HAPLN3Q96S86 360 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 STOML2Q9UJZ1 356 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 NDRG2Q9UN36 371 aaKnown RBP12.83□□□□□ -0.36
GABPB1-208ENST00000558970 ATG2BQ96BY7 2078 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 SHROOM3Q8TF72 1996 aa12.83□□□□□ -0.36
GABPB1-208ENST00000558970 H0Y626 953 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms