RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PASD1Q8IV76 773 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 GPT2Q8TD30 523 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 DDX50Q9BQ39 737 aaKnown RBP17.65■□□□□ 0.42
LRRC28-210ENST00000558879 NAA15Q9BXJ9 866 aaKnown RBP17.65■□□□□ 0.42
LRRC28-210ENST00000558879 ITM2CQ9NQX7 267 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 FHOD1Q9Y613 1164 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 TYW5A2RUC4 315 aaKnown RBP17.64■□□□□ 0.41
LRRC28-210ENST00000558879 HSF2BPO75031 334 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 ERBB2P04626 1255 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 EPHX1P07099 455 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 CDH5P33151 784 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-210ENST00000558879 RPS24P62847 133 aaKnown RBP17.64■□□□□ 0.41
LRRC28-210ENST00000558879 TAF5Q15542 800 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 TCP11X2Q5H9J9 407 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 FAM183BPQ6ZVS7 135 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 TMPRSS6Q8IU80 811 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 FIBINQ8TAL6 211 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 CYB5D2Q8WUJ1 264 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 MYO19Q96H55 970 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 ZNF419Q96HQ0 510 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-210ENST00000558879 PPP1R13BQ96KQ4 1090 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 BTN2A3PQ96KV6 586 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 HSPA12BQ96MM6 686 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 CAPN10Q9HC96 672 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 WSB2Q9NYS7 404 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-210ENST00000558879 NFE2L3Q9Y4A8 694 aa17.64■□□□□ 0.41
LRRC28-210ENST00000558879 C4orf47A7E2U8 309 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 SYNCRIPO60506 623 aaKnown RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 DAB1O75553 588 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 MOCS2O96007 188 aaPredicted RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 APOEP02649 317 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 DLDP09622 509 aaKnown RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 HLA-EP13747 358 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 CD6P30203 668 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 ARID5AQ03989 594 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 LMAN2Q12907 356 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 DRAP1Q14919 205 aaPredicted RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 SLC26A9Q7LBE3 791 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 DEFB106AQ8N104 65 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 OR2T3Q8NH03 318 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 ENOX1Q8TC92 643 aaKnown RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 TTC17Q96AE7 1141 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 SIPA1Q96FS4 1042 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 PRMT1Q99873 361 aaKnown RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 NUSAP1Q9BXS6 441 aaKnown RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 FBRSQ9HAH7 460 aa17.63■□□□□ 0.41
LRRC28-210ENST00000558879 INTS6Q9UL03 887 aaKnown RBP17.63■□□□□ 0.41
LRRC28-210ENST00000558879 DOCK9Q9BZ29 2069 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 KCNU1A8MYU2 1149 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 LUC7L3O95232 432 aaKnown RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 TACR2P21452 398 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 TPMTP51580 245 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 DUOXA1Q1HG43 343 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 FNDC3BQ53EP0 1204 aaKnown RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 DCAF6Q58WW2 860 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 ZC3H12AQ5D1E8 599 aaKnown RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 EFHC1Q5JVL4 640 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 KLHDC7AQ5VTJ3 777 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 OTUD1Q5VV17 481 aaPredicted RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 C11orf57Q6ZUT1 292 aaPredicted RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 RABEPKQ7Z6M1 372 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 DEFB119Q8N690 84 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 ZNF366Q8N895 744 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 CEP76Q8TAP6 659 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 PRCCQ92733 491 aaPredicted RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 NOX5Q96PH1 765 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 STIM2Q9P246 746 aa17.62■□□□□ 0.41
LRRC28-210ENST00000558879 TPRP12270 2363 aaKnown RBP17.62■□□□□ 0.41
LRRC28-210ENST00000558879 KCNK5O95279 499 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 ASLP04424 464 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 ATP5BP06576 529 aaKnown RBP17.61■□□□□ 0.41
LRRC28-210ENST00000558879 SERPINF2P08697 491 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 UCHL3P15374 230 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 ENGP17813 658 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 POLR2EP19388 210 aaKnown RBP17.61■□□□□ 0.41
LRRC28-210ENST00000558879 KRT9P35527 623 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 BPIFB4P59827 614 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 CDH18Q13634 790 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 RAPGEF1Q13905 1077 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 FSCBQ5H9T9 825 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 DAB2IPQ5VWQ8 1189 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 RAP1GAP2Q684P5 730 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 CHSY1Q86X52 802 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 LGI2Q8N0V4 545 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 ATP6V0D2Q8N8Y2 350 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 FOXJ1Q92949 421 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 TOE1Q96GM8 510 aaKnown RBP17.61■□□□□ 0.41
LRRC28-210ENST00000558879 MRGPRX3Q96LB0 322 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 GBP4Q96PP9 640 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 GANQ9H2C0 597 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 FAM204AQ9H8W3 233 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 PLCB1Q9NQ66 1216 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 PLA2G4CQ9UP65 541 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 CEP83Q9Y592 693 aa17.61■□□□□ 0.41
LRRC28-210ENST00000558879 ITIH6Q6UXX5 1313 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms